Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k05
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    24   0.32 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.32 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.32 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   3.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.0  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 63  NQRYQRLFN*GEEERRQIGQNKEEP 137
           NQ Y ++F   E+   QI ++++EP
Sbjct: 96  NQNYSKVFGNDEKALEQIAKSEKEP 120


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 63  NQRYQRLFN*GEEERRQIGQNKEEP 137
           NQ Y ++F   E+   QI ++++EP
Sbjct: 156 NQNYSKVFGNDEKALEQIAKSEKEP 180


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 63  NQRYQRLFN*GEEERRQIGQNKEEP 137
           NQ Y ++F   E+   QI ++++EP
Sbjct: 156 NQNYSKVFGNDEKALEQIAKSEKEP 180


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 191 MTRVYRNLEHRTLNLTFSGFFFIL 120
           + +VY  L   T+NLTF     IL
Sbjct: 173 VVQVYPRLVVNTINLTFLTLLMIL 196


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 46  FNMPREIKDIKDFL 87
           FN+P E  ++ DFL
Sbjct: 95  FNIPDEKNEVNDFL 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,075
Number of Sequences: 336
Number of extensions: 1067
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)