Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k04
         (329 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YJZ2 Cluster: Putative uncharacterized protein; n=1; ...    32   2.8  
UniRef50_Q8IBT5 Cluster: Putative uncharacterized protein MAL7P1...    31   3.7  
UniRef50_A3DJ49 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  

>UniRef50_Q4YJZ2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 67

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 49  VFKI*MSVSVNIVNTSYIHSF--KYCQYGHEYXSIKSANGIKN 171
           ++K  + V V I+N  Y +SF  KYC +G+ Y  I +   +KN
Sbjct: 9   LYKFFILVYVEILNKYYFNSFKLKYCAHGYNYNYIYTKKLVKN 51


>UniRef50_Q8IBT5 Cluster: Putative uncharacterized protein
           MAL7P1.79; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.79 - Plasmodium
           falciparum (isolate 3D7)
          Length = 478

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 189 NVRIKK*LKKNCIYFFLNRAXIKNTN*KLXNS 284
           N+R+KK  KKNCIY ++    + N N  + N+
Sbjct: 7   NIRLKKKKKKNCIYLYIITIILCNVNIVIGNN 38


>UniRef50_A3DJ49 Cluster: Putative uncharacterized protein; n=1;
           Clostridium thermocellum ATCC 27405|Rep: Putative
           uncharacterized protein - Clostridium thermocellum
           (strain ATCC 27405 / DSM 1237)
          Length = 128

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +1

Query: 109 FKYCQY-GHEYXSIKSANGIKNQYCGXKMFGLKNN*KKTVFTFSLIEPKLKILIKNYXTV 285
           +K+C+  G E  S+ S NGI N Y        K   K  +FT  +I   + +   NY T 
Sbjct: 14  YKFCEVCGAETDSLISENGINNLYLSSVKRKKKPKIKAIIFTALIIVIGISVFFVNY-TK 72

Query: 286 DLYGILYNI 312
              G+  NI
Sbjct: 73  KRSGLYNNI 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,551,658
Number of Sequences: 1657284
Number of extensions: 3661663
Number of successful extensions: 5490
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5487
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 9961543501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)