Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k04
         (329 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   5.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   5.8  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    20   7.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   7.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    20   7.7  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 15  NILAXSGWSLYXFQDLDVCFSEHCKYE 95
           NI A + W      DLD C     KYE
Sbjct: 188 NISAKNPWFPRHASDLDNCNHLMTKYE 214


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 260 IFNXGSIKEKVNTVFFQLFFNPNIL 186
           IF+  +    V TVFF LF+   ++
Sbjct: 81  IFSASANASGVATVFFCLFYQNKLI 105


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 103 VYNSYLQCSLKQ 68
           ++++YLQC LK+
Sbjct: 39  LFDNYLQCLLKK 50


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 182 PQY*FFIPXALLIL 141
           P Y FF+P  L+ L
Sbjct: 196 PPYLFFVPPPLMFL 209


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 182 PQY*FFIPXALLIL 141
           P Y FF+P  L+ L
Sbjct: 429 PPYLFFVPPPLMFL 442


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 182 PQY*FFIPXALLIL 141
           P Y FF+P  L+ L
Sbjct: 429 PPYLFFVPPPLMFL 442


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 103 VYNSYLQCSLKQ 68
           ++++YLQC LK+
Sbjct: 39  LFDNYLQCLLKK 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,290
Number of Sequences: 336
Number of extensions: 1074
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)