Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j22
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   1.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   1.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.4  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   4.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   4.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.7  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.7  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.7  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.7  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 KKLGNVGQPDIVRGRSQGYL 139
           K++GN+  P +  G   GYL
Sbjct: 411 KRIGNIKAPGVCHGDDIGYL 430


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 KKLGNVGQPDIVRGRSQGYL 139
           K++GN+  P +  G   GYL
Sbjct: 413 KRIGNIKAPGVCHGDDIGYL 432


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 KKLGNVGQPDIVRGRSQGYL 139
           K++GN+  P +  G   GYL
Sbjct: 411 KRIGNIKAPGVCHGDDIGYL 430


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 KKLGNVGQPDIVRGRSQGYL 139
           K++GN+  P +  G   GYL
Sbjct: 413 KRIGNIKAPGVCHGDDIGYL 432


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 232 KRARHFVSPSKKKIRKRWAARY 167
           K+  HF+S +K+++ K   A+Y
Sbjct: 82  KKVIHFLSHNKQQMWKELTAKY 103


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 277 QLSTNSIQ*LAKFSQKRARHFVSPSKKK 194
           Q + NS     ++SQ R RH  S SK++
Sbjct: 191 QYNLNSKSLPRQYSQSRGRHNQSRSKRQ 218


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 11  RFRFECE*RAPAS 49
           RFR+ECE R+  S
Sbjct: 77  RFRYECEGRSAGS 89


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +3

Query: 180 QRFLIFFLLGLTKWRARFCENFANYCMLLVLNCKECL*LEIKIAS 314
           + +LIF  + +  W      N+A   ++L+ +  E + ++I+I S
Sbjct: 94  RHYLIFIFVNVFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYS 138


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 426 ELLLRDSAWGRSW 388
           E+L +DS W + W
Sbjct: 315 EILNKDSGWTKKW 327


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 148 LRSTPHYIWLPNV 186
           LR TP+ +W P+V
Sbjct: 78  LRITPNKLWKPDV 90


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 148 LRSTPHYIWLPNV 186
           LR TP+ +W P+V
Sbjct: 78  LRITPNKLWKPDV 90


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 148 LRSTPHYIWLPNV 186
           LR TP+ +W P+V
Sbjct: 78  LRITPNKLWKPDV 90


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 148 LRSTPHYIWLPNV 186
           LR TP+ +W P+V
Sbjct: 78  LRITPNKLWKPDV 90


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 148 LRSTPHYIWLPNV 186
           LR TP+ +W P+V
Sbjct: 78  LRITPNKLWKPDV 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,466
Number of Sequences: 336
Number of extensions: 2046
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)