Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j18
         (109 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026072-1|AAH26072.1|  370|Homo sapiens ubiquitin specific pept...    29   3.6  
AL355473-1|CAI16331.1|  370|Homo sapiens ubiquitin specific prot...    29   3.6  
AL158062-1|CAH70555.1|  370|Homo sapiens ubiquitin specific prot...    29   3.6  
AF022789-1|AAC23551.1|  355|Homo sapiens ubiquitin hydrolyzing e...    29   3.6  
BC037574-1|AAH37574.1|  366|Homo sapiens ubiquitin specific pept...    28   6.3  
AK024318-1|BAB14881.1|  366|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AK022614-1|BAB14133.1|  366|Homo sapiens protein ( Homo sapiens ...    28   6.3  

>BC026072-1|AAH26072.1|  370|Homo sapiens ubiquitin specific
           peptidase 12 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R    KVL+  +Q
Sbjct: 44  FGNTCYCNSVLQA--LYFCRPFREKVLAYKSQ 73


>AL355473-1|CAI16331.1|  370|Homo sapiens ubiquitin specific
           protease 12 like 1 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R    KVL+  +Q
Sbjct: 44  FGNTCYCNSVLQA--LYFCRPFREKVLAYKSQ 73


>AL158062-1|CAH70555.1|  370|Homo sapiens ubiquitin specific
           protease 12 like 1 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R    KVL+  +Q
Sbjct: 44  FGNTCYCNSVLQA--LYFCRPFREKVLAYKSQ 73


>AF022789-1|AAC23551.1|  355|Homo sapiens ubiquitin hydrolyzing
           enzyme I protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R    KVL+  +Q
Sbjct: 29  FGNTCYCNSVLQA--LYFCRPFREKVLAYKSQ 58


>BC037574-1|AAH37574.1|  366|Homo sapiens ubiquitin specific
           peptidase 46 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R     VL+  AQ
Sbjct: 40  FGNTCYCNSVLQA--LYFCRPFRENVLAYKAQ 69


>AK024318-1|BAB14881.1|  366|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14256 fis, clone PLACE1000007, weakly similar to
           PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE R10E11.3
           (EC ).
          Length = 366

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R     VL+  AQ
Sbjct: 40  FGNTCYCNSVLQA--LYFCRPFRENVLAYKAQ 69


>AK022614-1|BAB14133.1|  366|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12552 fis, clone NT2RM4000712, moderately
           similar to Homo sapiens ubiquitin hydrolyzing enzyme I
           (UBH1) mRNA. ).
          Length = 366

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -2

Query: 105 F*TSCYCNSVVDSVKLYFARANVSKVLSSCAQ 10
           F  +CYCNSV+ +  LYF R     VL+  AQ
Sbjct: 40  FGNTCYCNSVLQA--LYFCRPFRENVLAYKAQ 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,680,402
Number of Sequences: 237096
Number of extensions: 79742
Number of successful extensions: 139
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 76,859,062
effective HSP length: 16
effective length of database: 73,065,526
effective search space used: 1388244994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)