Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j16
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   411   e-115
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   410   e-115
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   409   e-114
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   409   e-114
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   197   9e-51
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    32   0.75 
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    32   0.75 
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    29   5.3  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    29   5.3  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    29   5.3  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.0  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  411 bits (1011), Expect = e-115
 Identities = 187/210 (89%), Positives = 198/210 (94%), Gaps = 1/210 (0%)
 Frame = +3

Query: 9   WCHFVK-ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVH 185
           W   V  + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVH
Sbjct: 11  WKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVH 70

Query: 186 LVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 365
           LVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL
Sbjct: 71  LVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 130

Query: 366 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 545
           QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKW
Sbjct: 131 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKW 190

Query: 546 GFTKYERDEFEKLREEGRLANDGCIVQYRP 635
           GFTKYER+ +E+LR++ RL  DGC V+YRP
Sbjct: 191 GFTKYERERYEELRDDNRLEPDGCNVKYRP 220


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  410 bits (1010), Expect = e-115
 Identities = 185/203 (91%), Positives = 196/203 (96%)
 Frame = +3

Query: 27  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 206
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 207 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 386
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 387 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 566
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 567 DEFEKLREEGRLANDGCIVQYRP 635
           + +E+LR++ RL  DGC V+YRP
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRP 214


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  409 bits (1008), Expect = e-114
 Identities = 185/201 (92%), Positives = 195/201 (97%)
 Frame = +3

Query: 33  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 212
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 213 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 392
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 393 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 572
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 573 FEKLREEGRLANDGCIVQYRP 635
           +E+LR++ RL  DGC V+YRP
Sbjct: 181 YEELRDDNRLEPDGCNVKYRP 201


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  409 bits (1008), Expect = e-114
 Identities = 185/201 (92%), Positives = 195/201 (97%)
 Frame = +3

Query: 33  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 212
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 213 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 392
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 393 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 572
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 573 FEKLREEGRLANDGCIVQYRP 635
           +E+LR++ RL  DGC V+YRP
Sbjct: 181 YEELRDDNRLEPDGCNVKYRP 201


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  197 bits (481), Expect = 9e-51
 Identities = 117/205 (57%), Positives = 134/205 (65%), Gaps = 2/205 (0%)
 Frame = +3

Query: 27  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 206
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 207 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 380
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 381 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 560
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 561 ERDEFEKLREEGRLANDGCIVQYRP 635
           ER+ +E+LR++ RL  DGC V+YRP
Sbjct: 156 ERERYEELRDDNRLEPDGCNVKYRP 180


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 442 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 618
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 619 LCSTA 633
           L  TA
Sbjct: 355 LAKTA 359


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 442 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 618
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 619 LCSTA 633
           L  TA
Sbjct: 355 LAKTA 359


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 6    LWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 110
            L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1109 LTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 6   LWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 110
           L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 516 LTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 6    LWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 110
            L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1109 LTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -3

Query: 231 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 91
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,932,444
Number of Sequences: 53049
Number of extensions: 766421
Number of successful extensions: 2395
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2394
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)