Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j15
         (153 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro...    26   6.2  
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ...    26   6.2  
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P...    26   6.2  

>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
           protein.
          Length = 1412

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 132 MKLTTQNCEE*GIKILRRLQRSRKKHGENLPTG 34
           ++L  +  E+ G+K+LR + RS + +GE +  G
Sbjct: 321 LRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVG 353


>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
           stability factor protein.
          Length = 1412

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 132 MKLTTQNCEE*GIKILRRLQRSRKKHGENLPTG 34
           ++L  +  E+ G+K+LR + RS + +GE +  G
Sbjct: 321 LRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVG 353


>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
           protein.
          Length = 1412

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 132 MKLTTQNCEE*GIKILRRLQRSRKKHGENLPTG 34
           ++L  +  E+ G+K+LR + RS + +GE +  G
Sbjct: 321 LRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVG 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,596,603
Number of Sequences: 53049
Number of extensions: 88629
Number of successful extensions: 209
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 24,988,368
effective HSP length: 31
effective length of database: 23,343,849
effective search space used: 443533131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)