Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j15
         (153 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z66516-4|CAA91359.2|  500|Caenorhabditis elegans Hypothetical pr...    26   4.2  
U53332-9|AAO38632.1|  392|Caenorhabditis elegans Ceramide glucos...    25   5.5  
U53332-8|AAL32224.1|  459|Caenorhabditis elegans Ceramide glucos...    25   5.5  
U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucos...    25   5.5  
DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide glyc...    25   5.5  
DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide glyc...    25   5.5  
DQ178632-1|ABD75711.1|  392|Caenorhabditis elegans ceramide glyc...    25   5.5  

>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 99  GIKILRRLQRSRKKHGENLPTGGRSRRKGE 10
           G  +  R    RKKHG ++   GR RR G+
Sbjct: 97  GNDMKHRENMDRKKHGTHVDHHGRVRRNGD 126


>Z66516-4|CAA91359.2|  500|Caenorhabditis elegans Hypothetical
           protein W03C9.6 protein.
          Length = 500

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 62  FRLLWSLRKILIPYSSQFWVVSFIAL*Q 145
           F  LW++  I++   S +W+ +F  L Q
Sbjct: 471 FETLWTINGIVVALGSIYWIANFSRLRQ 498


>U53332-9|AAO38632.1|  392|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform d protein.
          Length = 392

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 47  FSPCFFRLLWSLRKILIPY 103
           FSP  F L+W LR++  P+
Sbjct: 343 FSPLQFMLIWLLRELTAPF 361


>U53332-8|AAL32224.1|  459|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform a protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 47  FSPCFFRLLWSLRKILIPY 103
           FSP  F L+W LR++  P+
Sbjct: 410 FSPLQFMLIWLLRELTAPF 428


>U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform b protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 47  FSPCFFRLLWSLRKILIPY 103
           FSP  F L+W LR++  P+
Sbjct: 421 FSPLQFMLIWLLRELTAPF 439


>DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 47  FSPCFFRLLWSLRKILIPY 103
           FSP  F L+W LR++  P+
Sbjct: 421 FSPLQFMLIWLLRELTAPF 439


>DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 47  FSPCFFRLLWSLRKILIPY 103
           FSP  F L+W LR++  P+
Sbjct: 421 FSPLQFMLIWLLRELTAPF 439


>DQ178632-1|ABD75711.1|  392|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 392

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 47  FSPCFFRLLWSLRKILIPY 103
           FSP  F L+W LR++  P+
Sbjct: 343 FSPLQFMLIWLLRELTAPF 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,434,722
Number of Sequences: 27780
Number of extensions: 47474
Number of successful extensions: 133
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 12,740,198
effective HSP length: 31
effective length of database: 11,879,018
effective search space used: 225701342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)