Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19j14
(519 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 231 6e-61
AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 231 6e-61
AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 217 7e-57
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro... 31 0.71
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P... 31 0.71
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P... 31 0.71
AF160929-1|AAD46869.1| 281|Drosophila melanogaster BcDNA.LD1215... 28 8.7
AE014297-3187|AAN13913.2| 281|Drosophila melanogaster CG31289-P... 28 8.7
>AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC,
isoform C protein.
Length = 155
Score = 231 bits (564), Expect = 6e-61
Identities = 113/143 (79%), Positives = 125/143 (87%)
Frame = +3
Query: 21 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 200
MADQ ER+FQKQ V LNRK G+ + +K LR +DVGLGFKTPREAI+GTYIDKKCP+
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59
Query: 201 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 380
TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE
Sbjct: 60 TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119
Query: 381 GDIVTIGECRPLSKTVRFNVLKV 449
GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 120 GDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA,
isoform A protein.
Length = 155
Score = 231 bits (564), Expect = 6e-61
Identities = 113/143 (79%), Positives = 125/143 (87%)
Frame = +3
Query: 21 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 200
MADQ ER+FQKQ V LNRK G+ + +K LR +DVGLGFKTPREAI+GTYIDKKCP+
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59
Query: 201 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 380
TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE
Sbjct: 60 TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119
Query: 381 GDIVTIGECRPLSKTVRFNVLKV 449
GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 120 GDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB,
isoform B protein.
Length = 154
Score = 217 bits (530), Expect = 7e-57
Identities = 106/144 (73%), Positives = 124/144 (86%), Gaps = 1/144 (0%)
Frame = +3
Query: 21 MADQ-TERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCP 197
MADQ TERSF+KQ V + R+K +K+ +P R+++ +GLGF+ P EAI+GTYIDKKCP
Sbjct: 1 MADQQTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCP 57
Query: 198 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 377
+TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE
Sbjct: 58 WTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVE 117
Query: 378 IGDIVTIGECRPLSKTVRFNVLKV 449
GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 118 HGDIVTIGECRPLSKTVRFNVLKV 141
>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 213 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 353
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
isoform B protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 213 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 353
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
isoform A protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 213 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 353
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AF160929-1|AAD46869.1| 281|Drosophila melanogaster BcDNA.LD12153
protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 188 LVNVGTLNRLAGSLETEAHILVVSQRFSAPLHTNTFLAVQK 66
LV G LAG+ E++ +LVV F A HT+ L ++
Sbjct: 60 LVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE 100
>AE014297-3187|AAN13913.2| 281|Drosophila melanogaster CG31289-PA
protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 188 LVNVGTLNRLAGSLETEAHILVVSQRFSAPLHTNTFLAVQK 66
LV G LAG+ E++ +LVV F A HT+ L ++
Sbjct: 60 LVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE 100
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,244,892
Number of Sequences: 53049
Number of extensions: 458276
Number of successful extensions: 1292
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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