Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j06
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104420-1|AAI04421.1|  249|Homo sapiens tumor necrosis factor (...    34   0.32 
AY358870-1|AAQ89229.1|  249|Homo sapiens Apo-3 Ligand protein.         34   0.32 
AY081051-1|AAL90443.1|  330|Homo sapiens TWE-PRIL protein.             34   0.32 
AF055872-1|AAC39724.1|  249|Homo sapiens Apo3/DR3 ligand protein.      34   0.32 
AF030099-1|AAC51923.1|  249|Homo sapiens TWEAK protein.                34   0.32 
AB222993-1|BAE16557.1|  249|Homo sapiens TWEAK protein.                34   0.32 

>BC104420-1|AAI04421.1|  249|Homo sapiens tumor necrosis factor
           (ligand) superfamily, member 12 protein.
          Length = 249

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
           E   +P++LN +   +Q    F N L+     AP  R     + +   Y+ H R   +G 
Sbjct: 63  EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122

Query: 90  AANSAGTRAGWDESR 46
            A   GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137


>AY358870-1|AAQ89229.1|  249|Homo sapiens Apo-3 Ligand protein.
          Length = 249

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
           E   +P++LN +   +Q    F N L+     AP  R     + +   Y+ H R   +G 
Sbjct: 63  EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122

Query: 90  AANSAGTRAGWDESR 46
            A   GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137


>AY081051-1|AAL90443.1|  330|Homo sapiens TWE-PRIL protein.
          Length = 330

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
           E   +P++LN +   +Q    F N L+     AP  R     + +   Y+ H R   +G 
Sbjct: 63  EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122

Query: 90  AANSAGTRAGWDESR 46
            A   GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137


>AF055872-1|AAC39724.1|  249|Homo sapiens Apo3/DR3 ligand protein.
          Length = 249

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
           E   +P++LN +   +Q    F N L+     AP  R     + +   Y+ H R   +G 
Sbjct: 63  EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122

Query: 90  AANSAGTRAGWDESR 46
            A   GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137


>AF030099-1|AAC51923.1|  249|Homo sapiens TWEAK protein.
          Length = 249

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
           E   +P++LN +   +Q    F N L+     AP  R     + +   Y+ H R   +G 
Sbjct: 63  EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122

Query: 90  AANSAGTRAGWDESR 46
            A   GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137


>AB222993-1|BAE16557.1|  249|Homo sapiens TWEAK protein.
          Length = 249

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 264 EACSEPTDLNREGISTQ--TNFRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGP 91
           E   +P++LN +   +Q    F N L+     AP  R     + +   Y+ H R   +G 
Sbjct: 63  EEDQDPSELNPQTEESQDPAPFLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGA 122

Query: 90  AANSAGTRAGWDESR 46
            A   GT +GW+E+R
Sbjct: 123 QAGVDGTVSGWEEAR 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,140,454
Number of Sequences: 237096
Number of extensions: 1074975
Number of successful extensions: 1824
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1824
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)