Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19j04
(518 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF492764-1|AAM11673.1| 417|Drosophila melanogaster gag protein ... 30 2.2
AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p pro... 29 3.8
AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH... 29 3.8
AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG... 29 3.8
AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF... 29 3.8
AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE... 29 3.8
AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD... 29 3.8
AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC... 29 3.8
AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB... 29 3.8
AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA... 29 3.8
BT021306-1|AAX33454.1| 745|Drosophila melanogaster RE19569p pro... 29 5.0
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC... 29 5.0
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD... 29 5.0
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB... 29 5.0
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA... 29 5.0
AY089414-1|AAL90152.1| 195|Drosophila melanogaster AT23593p pro... 28 6.6
AY051735-1|AAK93159.1| 387|Drosophila melanogaster LD26258p pro... 28 6.6
AE014296-518|AAF47694.1| 387|Drosophila melanogaster CG9972-PA ... 28 6.6
X16962-1|CAA34836.1| 215|Drosophila melanogaster R1 18c protein. 28 8.7
BT004840-1|AAO45196.1| 215|Drosophila melanogaster RH09844p pro... 28 8.7
AY069620-1|AAL39765.1| 696|Drosophila melanogaster LD39110p pro... 28 8.7
AE014296-3433|AAF51647.1| 215|Drosophila melanogaster CG3354-PA... 28 8.7
AE014296-2660|AAF49526.1| 696|Drosophila melanogaster CG5018-PA... 28 8.7
AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-P... 28 8.7
>AF492764-1|AAM11673.1| 417|Drosophila melanogaster gag protein
protein.
Length = 417
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = +1
Query: 163 NRYQPGYQLSNNRFVSTSDINRITRNNDVPNIRNVFQGISDPQINSLRQLRRMDNVPD-- 336
NR+ P + N F T + NN V R G + I LR + N P+
Sbjct: 288 NRFGPNQTYTPNNFPPTGNTQT---NNPVKRQRPSDSGQTKMSIEELRYQEMVSNQPEYP 344
Query: 337 FHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQN 441
+HY+ N Q +P P+ Q +Q+
Sbjct: 345 YHYYYPYYPDNFQPQPYPYQMSYIPDPTQIPFEQD 379
>AY075429-1|AAL68245.1| 1384|Drosophila melanogaster LD47780p
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-123|AAX52511.1| 1384|Drosophila melanogaster CG31992-PH,
isoform H protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-122|AAX52510.1| 1384|Drosophila melanogaster CG31992-PG,
isoform G protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-121|AAN06509.1| 1384|Drosophila melanogaster CG31992-PF,
isoform F protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-120|AAN06508.1| 1384|Drosophila melanogaster CG31992-PE,
isoform E protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-119|AAN06507.1| 1384|Drosophila melanogaster CG31992-PD,
isoform D protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-118|AAF59324.2| 1384|Drosophila melanogaster CG31992-PC,
isoform C protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-117|AAF59322.2| 1384|Drosophila melanogaster CG31992-PB,
isoform B protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>AE014135-116|AAF59323.2| 1384|Drosophila melanogaster CG31992-PA,
isoform A protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 367 NAVRQNFPETNVRTPEGVQNALQQNPRLH 453
N ++ NF E N+ P G Q A Q RL+
Sbjct: 845 NNLQSNFSELNINKPSGYQGASNQQSRLN 873
>BT021306-1|AAX33454.1| 745|Drosophila melanogaster RE19569p
protein.
Length = 745
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 190 SNNRFVSTSDINRITRNNDV----PNIRNVFQGISDPQINSLRQLRRMDNVPDFHYHTKQ 357
+N F + + +TR ++ + N+F+ I D L+++ +DN D +
Sbjct: 64 ANTNFKTVTKSKNVTRYGNIHIREQQLLNIFEVIIDTLEGKLKRIDSLDNTVDLLMKNME 123
Query: 358 TRSNAVRQNFPETN 399
T N V N +T+
Sbjct: 124 TLQNRVVNNVLKTD 137
>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
isoform C protein.
Length = 1573
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQRA 332
H H +H R PQH Q H N+ AP A +H QR+
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRS 1280
>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
isoform D protein.
Length = 1848
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQRA 332
H H +H R PQH Q H N+ AP A +H QR+
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRS 1280
>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
isoform B protein.
Length = 1848
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQRA 332
H H +H R PQH Q H N+ AP A +H QR+
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRS 1280
>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
isoform A protein.
Length = 1848
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 210 HFRHKQNHS*QRCPQHTQCISGHFRPSNKLIAPIA-AHGQRA 332
H H +H R PQH Q H N+ AP A +H QR+
Sbjct: 1239 HHHHHHHHPQHRLPQHVQHQHPHQHHPNEFKAPPADSHLQRS 1280
>AY089414-1|AAL90152.1| 195|Drosophila melanogaster AT23593p
protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 350 PNRRDPMQSDKTSQRPTCARPKVFKTHCS 436
P R+ M+ K +P C +PK K CS
Sbjct: 166 PRPRNSMECGKPKAKPRCLKPKSSKPKCS 194
>AY051735-1|AAK93159.1| 387|Drosophila melanogaster LD26258p
protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 389 QRPTCARP-KVFKTHCSKTPVYII 457
Q PTCARP K + H P Y+I
Sbjct: 53 QTPTCARPGKTYCEHADNYPTYLI 76
>AE014296-518|AAF47694.1| 387|Drosophila melanogaster CG9972-PA
protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 389 QRPTCARP-KVFKTHCSKTPVYII 457
Q PTCARP K + H P Y+I
Sbjct: 53 QTPTCARPGKTYCEHADNYPTYLI 76
>X16962-1|CAA34836.1| 215|Drosophila melanogaster R1 18c protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 350 PNRRDPMQSDKTSQRPTCARPKVFKTHCS 436
P R M+ K +P C +PK K CS
Sbjct: 186 PRPRKKMECGKAKAKPRCLKPKSSKPKCS 214
>BT004840-1|AAO45196.1| 215|Drosophila melanogaster RH09844p
protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 350 PNRRDPMQSDKTSQRPTCARPKVFKTHCS 436
P R M+ K +P C +PK K CS
Sbjct: 186 PRPRKKMECGKAKAKPRCLKPKSSKPKCS 214
>AY069620-1|AAL39765.1| 696|Drosophila melanogaster LD39110p
protein.
Length = 696
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = -3
Query: 378 SDCIGSRLFGVVMKVWHVVHAPQLAQ*VYLRV*NALKYIAYVGDIVVTSD 229
S C+ V+++W++ HAP L + ++L + ++ IA+ G+ + + D
Sbjct: 39 SKCLALSRATPVIELWNLEHAPYLDRVIHLPTDSHVESIAWAGNRLFSVD 88
>AE014296-3433|AAF51647.1| 215|Drosophila melanogaster CG3354-PA
protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 350 PNRRDPMQSDKTSQRPTCARPKVFKTHCS 436
P R M+ K +P C +PK K CS
Sbjct: 186 PRPRKKMECGKAKAKPRCLKPKSSKPKCS 214
>AE014296-2660|AAF49526.1| 696|Drosophila melanogaster CG5018-PA
protein.
Length = 696
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = -3
Query: 378 SDCIGSRLFGVVMKVWHVVHAPQLAQ*VYLRV*NALKYIAYVGDIVVTSD 229
S C+ V+++W++ HAP L + ++L + ++ IA+ G+ + + D
Sbjct: 39 SKCLALSRATPVIELWNLEHAPYLDRVIHLPTDSHVESIAWAGNRLFSVD 88
>AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-PA
protein.
Length = 283
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +1
Query: 190 SNNRFVSTSDINRITRNNDVPNIRNVFQGISDPQINSLRQLRRMDNVPDFHYHTKQTRS- 366
S+NR V +S+ +++T+N+ ++R + S Q ++ H KQ S
Sbjct: 132 SSNRIVDSSNYSKMTKNSFRGSMRFTTPSTNPQSSYSSSQQQQQQQQQQQKQHQKQHNSS 191
Query: 367 -NAVRQNFPETNVRTPEGVQNALQQNPRLHN 456
N+ R++ P ++V + N + R HN
Sbjct: 192 RNSERKSKP-SSVNHRDRDSNQTRSRNRTHN 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,669,225
Number of Sequences: 53049
Number of extensions: 574785
Number of successful extensions: 1622
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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