Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19j03
         (944 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   150   5e-38
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           83   9e-18
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           80   8e-17
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            28   0.47 
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        25   3.3  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  150 bits (364), Expect = 5e-38
 Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
 Frame = +3

Query: 15  KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
           KAI  + G   V G +   Q S   P+ I   ++ L  G HGFH+HE GD ++GC S G 
Sbjct: 22  KAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCASTGG 81

Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
           H+NP    HGAP+ ++RHVGDLGNI +   N + + +  D V+SLYG  ++IGR++V+H 
Sbjct: 82  HYNPDKVSHGAPNDQVRHVGDLGNI-AADENGIAKTSYSDTVVSLYGARSVIGRAIVIHA 140

Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAI 458
           + DDLG T HP S  TGN+ GR+ CG+I I
Sbjct: 141 EVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 83.4 bits (197), Expect = 9e-18
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +3

Query: 192 FNPTNEDHGAPDAEIRHVGDLGNIKSVGYNS-LTEINMMDNVMSLYGPHNIIGRSLVVHT 368
           +NP   DHGAPD    HVGDLGNI  V Y++ L +I + +  ++L G  +IIGR+L +  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNI--VAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISE 58

Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
            +DDLG  +H  SKTTGNS   + C II + +
Sbjct: 59  YEDDLGRGKHDYSKTTGNSGNCIACAIIGVAR 90


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 80.2 bits (189), Expect = 8e-17
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = +3

Query: 240 HVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTG 419
           H GD+GNI +   N   ++++    ++L G  N++GRSLVVH D DDLG+  H LSKTTG
Sbjct: 1   HAGDMGNIVA-DENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTG 59

Query: 420 NSDGRLGCGIIAICK 464
           ++  RL CG+I +CK
Sbjct: 60  DAGARLACGVIGLCK 74


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -2

Query: 592  QFSFEKQMTSFLKFSFEKQMTSSLDCVLHVEFYS*SELKR*HHLHM 455
            Q+ ++KQ    L+FS  K+   +LD V+H  + S  ++ R   +H+
Sbjct: 1938 QYLYDKQ--GILRFSLHKEHNETLDRVIHFTYVSDDKVAREALVHL 1981


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +3

Query: 585 LNWLYEYNSTCKT*SRDDVICFSKLNSL 668
           ++W+Y++ + CK  S     C+S ++ +
Sbjct: 78  IDWVYKHTNNCKIESASRAACYSVVDKV 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,673
Number of Sequences: 2352
Number of extensions: 17477
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)