Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19j03
(944 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 163 8e-40
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 163 8e-40
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 163 8e-40
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 163 8e-40
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 163 8e-40
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 163 8e-40
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 163 8e-40
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 163 8e-40
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 163 8e-40
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 163 8e-40
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 160 6e-39
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 126 1e-28
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 126 1e-28
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 126 1e-28
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 126 1e-28
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 126 1e-28
U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase prot... 83 1e-15
J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein. 83 1e-15
CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein. 83 1e-15
BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,... 83 1e-15
AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,... 83 1e-15
X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxid... 43 0.002
X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxid... 42 0.004
L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase prot... 40 0.017
X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxid... 35 0.37
X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismuta... 33 1.5
L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase prot... 32 2.6
BC037563-1|AAH37563.1| 770|Homo sapiens component of oligomeric... 31 8.1
BC000549-1|AAH00549.1| 770|Homo sapiens component of oligomeric... 31 8.1
AY358632-1|AAQ88995.1| 491|Homo sapiens COG7 protein. 31 8.1
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 163 bits (396), Expect = 8e-40
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ D+V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 160 bits (389), Expect = 6e-39
Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Frame = +3
Query: 15 KAICIISGD--VHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGE 188
KA+C++ GD V G I F+Q+ +N P+K+ G + L GLHGFHVHE+GD + GCTSAG
Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGP 63
Query: 189 HFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHT 368
HFNP + HG P E RHVGDLGN+ + + + ++++ +V+SL G H IIGR+LVVH
Sbjct: 64 HFNPLSRKHGGPKDEERHVGDLGNV-TADKDGVADVSIEGSVISLSGDHCIIGRTLVVHE 122
Query: 369 DKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
DDLG + S TGN+ RL CG+I I +
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 126 bits (304), Expect = 1e-28
Identities = 65/140 (46%), Positives = 82/140 (58%)
Frame = +3
Query: 36 GDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDH 215
G V G + F Q + R L I G + L GLHG HVH+YGD +N C S G HFNP H
Sbjct: 97 GTVQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASH 155
Query: 216 GAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTE 395
G P RH GDLGN+++ + M D + ++ ++IGRSL++ +DDLG
Sbjct: 156 GGPQDSDRHRGDLGNVRA-DADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGG 211
Query: 396 HPLSKTTGNSDGRLGCGIIA 455
HPLSK TGNS RL CGIIA
Sbjct: 212 HPLSKITGNSGERLACGIIA 231
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 126 bits (304), Expect = 1e-28
Identities = 65/140 (46%), Positives = 82/140 (58%)
Frame = +3
Query: 36 GDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDH 215
G V G + F Q + R L I G + L GLHG HVH+YGD +N C S G HFNP H
Sbjct: 97 GTVQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASH 155
Query: 216 GAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTE 395
G P RH GDLGN+++ + M D + ++ ++IGRSL++ +DDLG
Sbjct: 156 GGPQDSDRHRGDLGNVRA-DADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGG 211
Query: 396 HPLSKTTGNSDGRLGCGIIA 455
HPLSK TGNS RL CGIIA
Sbjct: 212 HPLSKITGNSGERLACGIIA 231
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 126 bits (304), Expect = 1e-28
Identities = 65/140 (46%), Positives = 82/140 (58%)
Frame = +3
Query: 36 GDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDH 215
G V G + F Q + R L I G + L GLHG HVH+YGD +N C S G HFNP H
Sbjct: 97 GTVQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASH 155
Query: 216 GAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTE 395
G P RH GDLGN+++ + M D + ++ ++IGRSL++ +DDLG
Sbjct: 156 GGPQDSDRHRGDLGNVRA-DADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGG 211
Query: 396 HPLSKTTGNSDGRLGCGIIA 455
HPLSK TGNS RL CGIIA
Sbjct: 212 HPLSKITGNSGERLACGIIA 231
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 126 bits (304), Expect = 1e-28
Identities = 65/140 (46%), Positives = 82/140 (58%)
Frame = +3
Query: 36 GDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDH 215
G V G + F Q + R L I G + L GLHG HVH+YGD +N C S G HFNP H
Sbjct: 97 GTVQGVVRFLQLTPERCL-IDGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASH 155
Query: 216 GAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTE 395
G P RH GDLGN+++ + M D + ++ ++IGRSL++ +DDLG
Sbjct: 156 GGPQDSDRHRGDLGNVRA-DADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGG 211
Query: 396 HPLSKTTGNSDGRLGCGIIA 455
HPLSK TGNS RL CGIIA
Sbjct: 212 HPLSKITGNSGERLACGIIA 231
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 126 bits (304), Expect = 1e-28
Identities = 65/140 (46%), Positives = 82/140 (58%)
Frame = +3
Query: 36 GDVHGKIYFQQESANRPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDH 215
G V G + F Q + R L I G + L GLHG HVH+YGD +N C S G HFNP H
Sbjct: 97 GTVQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASH 155
Query: 216 GAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTE 395
G P RH GDLGN+++ + M D + ++ ++IGRSL++ +DDLG
Sbjct: 156 GGPQDSDRHRGDLGNVRA-DADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGG 211
Query: 396 HPLSKTTGNSDGRLGCGIIA 455
HPLSK TGNS RL CGIIA
Sbjct: 212 HPLSKITGNSGERLACGIIA 231
>U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase
protein.
Length = 240
Score = 83.4 bits (197), Expect = 1e-15
Identities = 44/108 (40%), Positives = 59/108 (54%)
Frame = +3
Query: 138 HVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVM 317
HVH++GD S GC S G H+NP H +H GD GN +V SL
Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAA 165
Query: 318 SLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAIC 461
SL GPH+I+GR++VVH +DDLG + S GN+ RL C ++ +C
Sbjct: 166 SLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVC 213
>J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 83.4 bits (197), Expect = 1e-15
Identities = 44/108 (40%), Positives = 59/108 (54%)
Frame = +3
Query: 138 HVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVM 317
HVH++GD S GC S G H+NP H +H GD GN +V SL
Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAA 165
Query: 318 SLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAIC 461
SL GPH+I+GR++VVH +DDLG + S GN+ RL C ++ +C
Sbjct: 166 SLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVC 213
>CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 83.4 bits (197), Expect = 1e-15
Identities = 44/108 (40%), Positives = 59/108 (54%)
Frame = +3
Query: 138 HVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVM 317
HVH++GD S GC S G H+NP H +H GD GN +V SL
Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAA 165
Query: 318 SLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAIC 461
SL GPH+I+GR++VVH +DDLG + S GN+ RL C ++ +C
Sbjct: 166 SLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVC 213
>BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 83.4 bits (197), Expect = 1e-15
Identities = 44/108 (40%), Positives = 59/108 (54%)
Frame = +3
Query: 138 HVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVM 317
HVH++GD S GC S G H+NP H +H GD GN +V SL
Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAA 165
Query: 318 SLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAIC 461
SL GPH+I+GR++VVH +DDLG + S GN+ RL C ++ +C
Sbjct: 166 SLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVC 213
>AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 83.4 bits (197), Expect = 1e-15
Identities = 44/108 (40%), Positives = 59/108 (54%)
Frame = +3
Query: 138 HVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVM 317
HVH++GD S GC S G H+NP H +H GD GN +V SL
Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAA 165
Query: 318 SLYGPHNIIGRSLVVHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAIC 461
SL GPH+I+GR++VVH +DDLG + S GN+ RL C ++ +C
Sbjct: 166 SLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVC 213
>X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 2. ).
Length = 32
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 75 ANRPLKISGYLLNLPRGLHGFHVHEYGDTS 164
+N P+K+ G + L GLHGFHVHE+GD +
Sbjct: 2 SNGPVKVWGSIKGLTEGLHGFHVHEFGDNT 31
>X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 4. ).
Length = 39
Score = 41.5 bits (93), Expect = 0.004
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +3
Query: 240 HVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLV 359
HVGDLGN+ + + + ++++ D+V+SL G H IIGR+LV
Sbjct: 1 HVGDLGNV-TADKDGVADVSIEDSVISLSGDHCIIGRTLV 39
>L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase
protein.
Length = 32
Score = 39.5 bits (88), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 75 ANRPLKISGYLLNLPRGLHGFHVHEYGDTS 164
+N P+K+ G + L GLHGFHV E+GD +
Sbjct: 2 SNGPVKVWGSIKGLTEGLHGFHVQEFGDNT 31
>X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 5 and 3' flanking region.
).
Length = 35
Score = 35.1 bits (77), Expect = 0.37
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 360 VHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
VH DDLG + S TGN+ RL CG+I I +
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 35
>X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismutase
protein.
Length = 35
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 360 VHTDKDDLGLTEHPLSKTTGNSDGRLGCGII 452
VH DDLG + S TGN+ RL CG+I
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLACGVI 31
>L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase
protein.
Length = 35
Score = 32.3 bits (70), Expect = 2.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 360 VHTDKDDLGLTEHPLSKTTGNSDGRLGCGIIAICK 464
VH D LG + S TGN+ RL CG+I I +
Sbjct: 1 VHEKADHLGKGGNEESTKTGNAGSRLACGVIGIAQ 35
>BC037563-1|AAH37563.1| 770|Homo sapiens component of oligomeric
golgi complex 7 protein.
Length = 770
Score = 30.7 bits (66), Expect = 8.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 60 FQQESANRPLKISGYLLN---LPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDA 230
F+Q+ ANR L +G L+ PR L GF D N + + +N +D+ A A
Sbjct: 485 FEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNPAEYA 544
Query: 231 EIRHV 245
+ +
Sbjct: 545 SLMEI 549
>BC000549-1|AAH00549.1| 770|Homo sapiens component of oligomeric
golgi complex 7 protein.
Length = 770
Score = 30.7 bits (66), Expect = 8.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 60 FQQESANRPLKISGYLLN---LPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDA 230
F+Q+ ANR L +G L+ PR L GF D N + + +N +D+ A A
Sbjct: 485 FEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNPAEYA 544
Query: 231 EIRHV 245
+ +
Sbjct: 545 SLMEI 549
>AY358632-1|AAQ88995.1| 491|Homo sapiens COG7 protein.
Length = 491
Score = 30.7 bits (66), Expect = 8.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 60 FQQESANRPLKISGYLLN---LPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDA 230
F+Q+ ANR L +G L+ PR L GF D N + + +N +D+ A A
Sbjct: 206 FEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNPAEYA 265
Query: 231 EIRHV 245
+ +
Sbjct: 266 SLMEI 270
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,501,117
Number of Sequences: 237096
Number of extensions: 2473891
Number of successful extensions: 3805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3780
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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