Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i23
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    24   0.85 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.85 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.85 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.0  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 169 EKQRRLERQHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSH 321
           E++   E++ A+T  R+K   L+    V   I     H+   S  ++ +SH
Sbjct: 57  EQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEALMSRGERRFSH 107


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 169 EKQRRLERQHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSH 321
           E++   E++ A+T  R+K   L+    V   I     H+   S  ++ +SH
Sbjct: 217 EQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEALMSRGERRFSH 267


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 169 EKQRRLERQHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSH 321
           E++   E++ A+T  R+K   L+    V   I     H+   S  ++ +SH
Sbjct: 217 EQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEALMSRGERRFSH 267


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 466 IPVGVWYGRRCQNISVQTRR 407
           +P+GV Y  +C+ + +Q +R
Sbjct: 55  VPIGVLYCMKCECVPLQKKR 74


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 83  KMVFDVYYNGYYVEKKFSKEFLIH 154
           K + D YY G   E      +LIH
Sbjct: 349 KKIRDFYYGGPNSENNLDNFYLIH 372


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 83  KMVFDVYYNGYYVEKKFSKEFLIH 154
           K + D YY G   E      +LIH
Sbjct: 351 KKIRDFYYGGPNSENNLDNFYLIH 374


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 214 RFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSHAQ 327
           R +   L  G    RQIL   W    F  + ++ SH Q
Sbjct: 462 RGQDVWLGKGAEQTRQILKCMWCGQSFRSLAEMTSHMQ 499


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,445
Number of Sequences: 336
Number of extensions: 2524
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)