Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i23
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060734-1|AAL28282.1|  334|Drosophila melanogaster GH18325p pro...    31   1.6  
AE013599-1808|AAF58308.1|  334|Drosophila melanogaster CG18568-P...    31   1.6  
AY113533-1|AAM29538.1|  274|Drosophila melanogaster RE60872p pro...    30   2.1  
AE014134-3269|AAF53913.1|  274|Drosophila melanogaster CG2617-PA...    30   2.1  
BT001338-1|AAN71093.1|  501|Drosophila melanogaster AT21229p pro...    28   8.4  
AE014297-4739|AAN14270.1|  501|Drosophila melanogaster CG31003-P...    28   8.4  
AE014134-370|AAN10417.1|  318|Drosophila melanogaster CG32463-PA...    28   8.4  

>AY060734-1|AAL28282.1|  334|Drosophila melanogaster GH18325p
           protein.
          Length = 334

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +1

Query: 193 QHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSHAQHNSQTDRQLASIKKP 372
           + +++ A   Q  L+TGV      +L   HK+    V+ +   AQ   Q DR+   +K+ 
Sbjct: 176 EESESKASKSQQLLETGVQTNESEILD--HKLILGEVKMVCPSAQLVDQIDRERLELKEE 233

Query: 373 GSRQTAAPF 399
             RQ++  F
Sbjct: 234 RERQSSRRF 242


>AE013599-1808|AAF58308.1|  334|Drosophila melanogaster CG18568-PA
           protein.
          Length = 334

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +1

Query: 193 QHAQTAARFKQACLQTGVAVQRQILLARWHKVCFSCVQQIYSHAQHNSQTDRQLASIKKP 372
           + +++ A   Q  L+TGV      +L   HK+    V+ +   AQ   Q DR+   +K+ 
Sbjct: 176 EESESKASKSQQLLETGVQTNESEILD--HKLILGEVKMVCPSAQLVDQIDRERLELKEE 233

Query: 373 GSRQTAAPF 399
             RQ++  F
Sbjct: 234 RERQSSRRF 242


>AY113533-1|AAM29538.1|  274|Drosophila melanogaster RE60872p
           protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 16  LDQKCPTCRQDVTDFIKIFV 75
           L+ +CP CR ++T F+ ++V
Sbjct: 255 LEDRCPVCRHNITSFLSVYV 274


>AE014134-3269|AAF53913.1|  274|Drosophila melanogaster CG2617-PA
           protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 16  LDQKCPTCRQDVTDFIKIFV 75
           L+ +CP CR ++T F+ ++V
Sbjct: 255 LEDRCPVCRHNITSFLSVYV 274


>BT001338-1|AAN71093.1|  501|Drosophila melanogaster AT21229p
           protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 326 STTVKRTDSSHRLKSQVVDKRPRRSLDSPRLDGYVLASSPIP 451
           S+T K   ++HR ++   ++ PR++ DS +     L+ SP P
Sbjct: 362 SSTTKEPSAAHRNRNTAGEESPRKTEDSQKPATAALSKSPGP 403


>AE014297-4739|AAN14270.1|  501|Drosophila melanogaster CG31003-PA
           protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 326 STTVKRTDSSHRLKSQVVDKRPRRSLDSPRLDGYVLASSPIP 451
           S+T K   ++HR ++   ++ PR++ DS +     L+ SP P
Sbjct: 362 SSTTKEPSAAHRNRNTAGEESPRKTEDSQKPATAALSKSPGP 403


>AE014134-370|AAN10417.1|  318|Drosophila melanogaster CG32463-PA
           protein.
          Length = 318

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
 Frame = +2

Query: 143 FLIHIAPDLK---NSVDWNGSTRKLLRVLNKRAYRQVLQCNGRYYWPD---GTKFVSHVY 304
           FL +IAP +    N   WN   + +  ++++  +  V  C G  Y P+   G K+   V 
Sbjct: 172 FLTNIAPQVGQGFNRSAWNNLEQYVRNLVHR--FGSVFVCTGPLYKPNQRPGGKWA--VE 227

Query: 305 NRSIRTHSTTVKRTDSSHRLKSQVVDKRPRRSLDSPRLDGYVLASSPIP 451
              I  +   V     +H  K  +V+ +    L  P ++GYVL ++PIP
Sbjct: 228 YEMIGLNMVAVP----THFFKVIMVESKLH--LGKPYMEGYVLPNAPIP 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,633,352
Number of Sequences: 53049
Number of extensions: 468461
Number of successful extensions: 1631
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)