Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19i21
(333 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 54 4e-08
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.014
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 35 0.014
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 35 0.014
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.033
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 34 0.033
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.044
SB_5526| Best HMM Match : zf-C3HC4 (HMM E-Value=2) 33 0.044
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 33 0.058
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 33 0.058
SB_11151| Best HMM Match : Neur_chan_memb (HMM E-Value=3.6e-10) 33 0.058
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.076
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.10
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 32 0.13
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 32 0.13
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 32 0.13
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 32 0.13
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 32 0.13
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 32 0.13
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 31 0.18
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 31 0.18
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 31 0.18
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 31 0.23
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 31 0.23
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 31 0.23
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 31 0.23
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 31 0.23
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.41
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.41
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 30 0.54
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 30 0.54
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.54
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 30 0.54
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 30 0.54
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 30 0.54
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 30 0.54
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 30 0.54
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 30 0.54
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 29 0.71
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 29 0.71
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 29 0.71
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 29 0.71
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 29 0.71
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 29 0.71
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 29 0.71
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 29 0.71
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 29 0.71
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.94
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 29 1.2
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 29 1.2
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 28 1.6
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 28 1.6
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 28 2.2
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 28 2.2
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 28 2.2
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 27 2.9
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 27 2.9
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_16197| Best HMM Match : zf-CCHC (HMM E-Value=0.19) 27 3.8
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 27 5.0
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 26 6.6
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 26 6.6
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015) 26 6.6
SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07) 26 6.6
SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12) 26 6.6
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 26 8.8
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_40737| Best HMM Match : Extensin_2 (HMM E-Value=2.2) 26 8.8
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 26 8.8
SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 53.6 bits (123), Expect = 4e-08
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 170 IFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
IF + + DC VCLQ+ +P +L CGH+FCFLC+K
Sbjct: 62 IFELDYQPDCPVCLQQASYPVRLPCGHMFCFLCIK 96
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 35.1 bits (77), Expect = 0.014
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
E +C +CL++ + P L C H FC+ C+
Sbjct: 13 EVECPICLERFKDPRVLPCLHTFCYECL 40
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 35.1 bits (77), Expect = 0.014
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
E++C +C + +P CGHVFC C+
Sbjct: 376 EFECTLCCRLFYNPVTTPCGHVFCRACL 403
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 35.1 bits (77), Expect = 0.014
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
E +C +CL++ + P L C H FC+ C+
Sbjct: 13 EVECPICLERFKDPRVLPCLHTFCYECL 40
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 33.9 bits (74), Expect = 0.033
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 176 SHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
S N ++C +CL + CGH+FC+ C+
Sbjct: 56 SANANFECNICLDTARDAVISMCGHLFCWPCL 87
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 33.9 bits (74), Expect = 0.033
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C+VCL++ + P L C H FC C++
Sbjct: 19 ELTCSVCLEQFREPKMLPCFHTFCKECLE 47
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.5 bits (73), Expect = 0.044
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
++ C +C + P +CGHVFC C+
Sbjct: 54 DFKCGICFGVLEDPLVTTCGHVFCSQCL 81
>SB_5526| Best HMM Match : zf-C3HC4 (HMM E-Value=2)
Length = 106
Score = 33.5 bits (73), Expect = 0.044
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 191 YDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
+ C++C + P + +C HVFC+ C+K
Sbjct: 79 HQCSICSEPPTAPHQGACEHVFCYYCIK 106
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 33.1 bits (72), Expect = 0.058
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 149 VLKHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
++ + + S + +C +CL P+ C HVFC C+
Sbjct: 49 LINQLLQVLSSGVSEECPICLDPLDDPSITRCAHVFCTGCL 89
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 33.1 bits (72), Expect = 0.058
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLC 268
++ C +CLQ P L C H FC +C
Sbjct: 34 DFTCPICLQLLVEPVVLPCEHEFCKMC 60
>SB_11151| Best HMM Match : Neur_chan_memb (HMM E-Value=3.6e-10)
Length = 434
Score = 33.1 bits (72), Expect = 0.058
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 302 LKKITKYFKPSHKEN--RKHDRRIVLLDVDIFASKQHNHIPYYVR 174
L +T ++ H E KH +RI+++D+DIFA K H Y++
Sbjct: 2 LSHVTCVYRALHDEIIFNKHIKRIIVVDLDIFADKSPLHSSQYMK 46
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 32.7 bits (71), Expect = 0.076
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLS-CGHVFCFLCVKV*SILLFFLNK 307
EY+C +C + P ++ CGH FC C++ L F++K
Sbjct: 23 EYECPICQLAFRDPIQIEECGHRFCQSCLQELRRLYVFVDK 63
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C VCL + ++P L C H FC CV+
Sbjct: 20 CPVCLGEYKNPMLLRCYHSFCLRCVQ 45
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 31.9 bits (69), Expect = 0.13
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 191 YDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
++C +C P + CGH +C C+K
Sbjct: 20 FECGLCGDFYVDPVTILCGHTYCLACIK 47
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
+++C +C P CGH FC C+
Sbjct: 327 DFECKLCFNLLLEPVTSLCGHSFCRDCL 354
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 31.9 bits (69), Expect = 0.13
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
CA+C + P C H FC LC+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLS-CGHVFCFLCV 271
C +C + +PT LS CG+VFC+ C+
Sbjct: 1201 CPLCAKVRTNPTALSTCGYVFCYPCI 1226
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 31.9 bits (69), Expect = 0.13
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
CA+C + P C H FC LC+
Sbjct: 34 CAICKEVLTQPIATPCDHYFCVLCI 58
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 31.9 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 194 DCAVCLQKCQHPTKLS-CGHVFCFLCV 271
+C +CL+ +P L CGH FC C+
Sbjct: 677 ECPICLETITYPETLQGCGHTFCRPCI 703
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 31.9 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 194 DCAVCLQKCQHPTKLS-CGHVFCFLCV 271
+C +CL+ +P L CGH FC C+
Sbjct: 752 ECPICLETITYPETLQGCGHTFCRPCI 778
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 31.9 bits (69), Expect = 0.13
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
CA+C + P C H FC LC+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 31.9 bits (69), Expect = 0.13
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
CA+C + P C H FC LC+
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCI 184
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 31.5 bits (68), Expect = 0.18
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C++CL++ Q P L+C H +C C++
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLE 42
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 31.5 bits (68), Expect = 0.18
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C++CL++ Q P L+C H +C C++
Sbjct: 26 CSLCLEQYQDPRVLACLHTYCRHCLE 51
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 31.5 bits (68), Expect = 0.18
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C++CL++ Q P L+C H +C C++
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLE 42
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 31.1 bits (67), Expect = 0.23
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCLHCLE 40
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 31.1 bits (67), Expect = 0.23
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +CL++ Q P L+C H +C C++
Sbjct: 16 CCLCLEQYQDPRVLACLHTYCRHCLE 41
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 31.1 bits (67), Expect = 0.23
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +CL++ Q P L+C H +C C++
Sbjct: 16 CCLCLEQYQDPRVLACLHTYCRHCLE 41
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLC 268
E+ C+ C + HP CGHV C C
Sbjct: 15 EFLCSYCRKVYLHPLVTGCGHVLCTKC 41
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ C VC + T L+C H FC C++
Sbjct: 368 EFSCIVCQELFIRATTLTCSHSFCEYCLQ 396
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E CA+C++ P L C H FC C++
Sbjct: 12 EVTCAICIEHFTDPRLLPCLHTFCRHCLE 40
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 152 LKHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
L+ A ++ S E +C++C + P L C H FC C+
Sbjct: 83 LQMASILDSLRQEAECSLCHKTPSEPKILKCFHTFCNECL 122
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 30.7 bits (66), Expect = 0.31
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
C +C + + P SCGH FC C+
Sbjct: 194 CPLCRRVFKDPVITSCGHTFCQACI 218
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 30.3 bits (65), Expect = 0.41
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
CA+C + P SCGH +C C++
Sbjct: 30 CAICHIVVKDPILTSCGHSYCKCCIQ 55
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 30.3 bits (65), Expect = 0.41
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 182 NMEYDCAVCLQKCQHPTKLSCGHVFCFLC 268
N E+ CA+CL + P C H C C
Sbjct: 20 NEEFHCAICLDVLEKPLSSKCQHSCCSDC 48
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 29.9 bits (64), Expect = 0.54
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 167 LIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
L+ H C C + + C HVFC+ C+K
Sbjct: 344 LVLFHQARLTCPCCNTRKKDAILTKCFHVFCYECLK 379
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C++CL + Q P L+C H +C C++
Sbjct: 17 CSLCLGQYQDPRVLACLHTYCRHCLE 42
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 11 EVTCSICIEHFNDPRVLPCFHSFCRHCLE 39
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHLNDPRVLPCLHSFCRHCLE 40
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 169 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 197
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVRCSICIEHFNDPRVLPCFHSFCRHCLE 40
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C VC Q+ P L C H FC C++
Sbjct: 62 CRVCNQRFNKPKLLHCLHSFCQSCIE 87
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 165 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 193
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 17 EVTCSICIEHFDDPRVLPCLHSFCRHCLE 45
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 73 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 101
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 313 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 341
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 639 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 667
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 29.5 bits (63), Expect = 0.71
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 191 YDCAVCLQKCQHPTKLSCGHVFCFLCVKV 277
+ C +C Q P + +CGH C C ++
Sbjct: 32 FRCTICKHVLQEPLQTTCGHRICESCFEL 60
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 171 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 199
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL + P C H C C K
Sbjct: 316 EFHCAICLDVLEKPLSSKCQHSCCSDCWK 344
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 40
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 11 EVTCSICIEHFNDPRVLPCLHSFCRHCLE 39
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.5 bits (63), Expect = 0.71
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +CL + + P LSC H C C++
Sbjct: 21 CPICLDEFKEPKTLSCMHDLCRKCLE 46
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 29.1 bits (62), Expect = 0.94
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSLCIEHFNDPRVLPCFHSFCRHCLE 40
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLE 40
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 12 EVTCSLCIEHFNDPRVLPCLHSFCRHCLE 40
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E C++C++ P L C H FC C++
Sbjct: 132 EVTCSLCIEHFNDPRVLPCLHSFCRHCLE 160
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C+ C ++P +L C H FC C+K
Sbjct: 18 CSACKGFYKNPKRLPCLHAFCCHCLK 43
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 28.7 bits (61), Expect = 1.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +C + + CGH FC +C++
Sbjct: 18 CGICAEVLERAVLTPCGHSFCGVCLE 43
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 182 NMEYDCAVCLQKCQHPTKLSCGHVFCFLC 268
N+ + C +C + ++P C H FC C
Sbjct: 240 NLPFACIMCRKTFKNPVVTKCLHYFCEAC 268
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 170 IFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
++ + +C++C + + P L C H FC C++
Sbjct: 11 VYELSKHLNCSLCHRLIRGPKLLPCLHSFCLACLE 45
>SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 218 CQHPTKLSCGHVFCFLCVK 274
C H T CG FC+LC+K
Sbjct: 258 CNHMTCAVCGAEFCWLCMK 276
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLS-CGHVFCFLCV 271
C C + +P +L+ CGHV+C CV
Sbjct: 1951 CPACFCEVDNPYQLATCGHVYCRGCV 1976
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL P C H C C K
Sbjct: 115 EFHCAICLDVLGKPLSSKCQHSCCSDCWK 143
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKL-SCGHVFCFLCVK 274
+Y C +C + P + CGH FC C++
Sbjct: 39 DYQCPICQLPFRDPVQTRDCGHRFCESCLE 68
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 188 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
E+ CA+CL P C H C C K
Sbjct: 115 EFHCAICLDVLGKPLSSKCQHSCCSDCWK 143
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +C + + P L C H +C CVK
Sbjct: 659 CPICSRPFKSPKILPCLHTYCSDCVK 684
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 182 NMEYDCAVCLQKCQHPTKLSCGHVFCFLCVK 274
N+ C +C + +P L C H FC C++
Sbjct: 140 NVNLFCPLCHEMFANPRLLPCLHTFCKRCLE 170
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 182 NMEYDCAVCLQKCQHPTKLSCGHV-FCFLCVK 274
N C +CL+ ++ L+CGHV C C +
Sbjct: 533 NQGTQCVICLENQRNVVLLNCGHVCSCRTCAQ 564
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
C C+ ++P L C H FC C+
Sbjct: 15 CPKCMNAYENPKVLPCLHTFCSQCL 39
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C++C + P L C HV+C C++
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQ 39
>SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFC 259
C VC+ + T +CGH FC
Sbjct: 100 CPVCITDARFLTMTNCGHEFC 120
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +2
Query: 155 KHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 271
+H + M C VC + P C H FC CV
Sbjct: 391 RHGTTFWCIKMSTICGVCRETYTDPRVAPCLHSFCKECV 429
>SB_16197| Best HMM Match : zf-CCHC (HMM E-Value=0.19)
Length = 241
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 291 NKILQTFTQRKQKT*PQDSFVGC*HFCKQTAQSYSILCEKINTACLSTHKLSH 133
N + Q+ T +K +T Q C + + S LC N C S HKL H
Sbjct: 141 NAMKQSSTHKKPQT--QSHSTACGNCGTKHDMSARSLCPAYNCECNSCHKLHH 191
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
C +C + +P L C H FC C+
Sbjct: 17 CGICQETYNNPKVLPCLHSFCQNCL 41
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 26.6 bits (56), Expect = 5.0
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCV 271
C +C + P C H +C CV
Sbjct: 18 CCICRDVLEEPLMAPCEHSYCSACV 42
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 240 DSFVGC*HFCKQTAQSYSILCEK 172
D+ GC HFC T Y C++
Sbjct: 12 DNNGGCQHFCNNTVGGYQCYCKR 34
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +C + + CGH+ C LC++
Sbjct: 185 CKICAENNKDVRIEPCGHLMCHLCLE 210
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +2
Query: 197 CAVCLQKCQHP---TKLSCGHVFCFLCV 271
C VCL T SC HVFC C+
Sbjct: 102 CPVCLMSLSEQKLGTPNSCMHVFCLECI 129
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +C + + CGH+ C LC++
Sbjct: 381 CKICAENNKDVRIEPCGHLMCHLCLE 406
>SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015)
Length = 921
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +2
Query: 191 YDCAVCLQKC----QHPTKLSCGHVFCFLC 268
Y C C + +HP CG V+CF C
Sbjct: 281 YRCKACKKVLAYSKRHPRDHKCGEVYCFNC 310
>SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07)
Length = 322
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 194 DCAVCLQKCQHPTKLSCGHVF 256
DCA+C KL C H+F
Sbjct: 90 DCAICWDNMGKARKLPCNHLF 110
>SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12)
Length = 259
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCG---HVFCFLCVK 274
C V +Q+ + ++ CG H+FC+ C+K
Sbjct: 188 CQVLIQRDEGCAQMMCGNCKHIFCWHCLK 216
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C C + + C HVFC+ C+K
Sbjct: 106 CPCCNTRKKDAILTKCFHVFCYECLK 131
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 140 NLCVLKHAVLIFSHNM 187
NL +L+H +LIF HN+
Sbjct: 359 NLLILRHHLLIFRHNL 374
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 140 NLCVLKHAVLIFSHNM 187
NL +L+H +LIF HN+
Sbjct: 394 NLIILRHHLLIFRHNL 409
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 140 NLCVLKHAVLIFSHNM 187
NL +L+H +LIF HN+
Sbjct: 471 NLLILRHHLLIFRHNL 486
>SB_40737| Best HMM Match : Extensin_2 (HMM E-Value=2.2)
Length = 409
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 188 PYYVRKLIQHA*VHINYLILIYPFPNYLNMCVVFHNFLTF 69
PYY+ +I + HI Y++ P+ Y +HN++T+
Sbjct: 324 PYYIY-IIYASPYHI-YIVYSSPYHTYTIYASPYHNYITY 361
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 25.8 bits (54), Expect = 8.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 197 CAVCLQKCQHPTKLSCGHVFCFLCVK 274
C +C+ ++ CGH FC C++
Sbjct: 18 CNICVGVLENAITTICGHSFCESCLE 43
>SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 323 TGLYFVYLKKITKYFKPSHKENRKHDRRIVLLD 225
TG+ YL KY KP N K R LLD
Sbjct: 475 TGILDRYLTNKPKYVKPLQYSNEKVKRYCTLLD 507
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,171,148
Number of Sequences: 59808
Number of extensions: 191947
Number of successful extensions: 629
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -