Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i17
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3107|AAF50836.3| 1637|Drosophila melanogaster CG1801-PA...    29   5.0  
AY061570-1|AAL29118.1|  730|Drosophila melanogaster SD01727p pro...    29   6.6  
AY058664-1|AAL13893.1|  730|Drosophila melanogaster LD37516p pro...    29   6.6  
AE014297-3674|AAF56370.1|  730|Drosophila melanogaster CG11771-P...    29   6.6  
BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p pro...    28   8.7  
AE014298-2417|AAF48618.2|  639|Drosophila melanogaster CG9906-PA...    28   8.7  
AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA...    28   8.7  

>AE014298-3107|AAF50836.3| 1637|Drosophila melanogaster CG1801-PA
           protein.
          Length = 1637

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 2   IWKNKTTTTTMAMIVHIFIYYLCCEYVHTYWDIN 103
           ++ N T     A+++ +F+Y   C  +  YWDI+
Sbjct: 339 LFANPTNAVLFALMLWLFMYAAFCIILERYWDIH 372


>AY061570-1|AAL29118.1|  730|Drosophila melanogaster SD01727p
           protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 548 QCVTFDKKDFEQDDVSDVFNDDW 616
           QC+  DKKD     ++D+F  DW
Sbjct: 625 QCMPLDKKDAHPCSLTDIFAGDW 647


>AY058664-1|AAL13893.1|  730|Drosophila melanogaster LD37516p
           protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 548 QCVTFDKKDFEQDDVSDVFNDDW 616
           QC+  DKKD     ++D+F  DW
Sbjct: 625 QCMPLDKKDAHPCSLTDIFAGDW 647


>AE014297-3674|AAF56370.1|  730|Drosophila melanogaster CG11771-PA
           protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 548 QCVTFDKKDFEQDDVSDVFNDDW 616
           QC+  DKKD     ++D+F  DW
Sbjct: 625 QCMPLDKKDAHPCSLTDIFAGDW 647


>BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p protein.
          Length = 1718

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/88 (23%), Positives = 37/88 (42%)
 Frame = +2

Query: 338  RKTNYLPSAKRKATCLDNDHLISQPVKLKLMNKETDTNKKLKQIKIENKDPLKQLEHSPI 517
            RKT    +   +AT +D   ++SQP+     +  + T   +  +     +P   L  S  
Sbjct: 881  RKTIATTTVAYRATLMDPPEVVSQPISSSSNSTSSSTQVTVTTVAKPVHEPRYSLMESTS 940

Query: 518  FNSLPDISNLQCVTFDKKDFEQDDVSDV 601
             NS    S +     D  D E D++S++
Sbjct: 941  RNSYTSTSGV-----DTTDNETDELSNI 963


>AE014298-2417|AAF48618.2|  639|Drosophila melanogaster CG9906-PA
           protein.
          Length = 639

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 287 ITAFFKNSDGPNNVAISRKTNYLPSAKRKATCLDNDHLISQPVKLKLMNKETD-TNKKLK 463
           IT F K   GP+ VA ++K     + K      D+D    +  KL+   KE +   ++ +
Sbjct: 487 ITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEE 546

Query: 464 QIKIENKDPLKQLE 505
           + K ENK+  K+ E
Sbjct: 547 EEKEENKEEKKEEE 560


>AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA
           protein.
          Length = 1857

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/88 (23%), Positives = 37/88 (42%)
 Frame = +2

Query: 338 RKTNYLPSAKRKATCLDNDHLISQPVKLKLMNKETDTNKKLKQIKIENKDPLKQLEHSPI 517
           RKT    +   +AT +D   ++SQP+     +  + T   +  +     +P   L  S  
Sbjct: 720 RKTIATTTVAYRATLMDPPEVVSQPISSSSNSTSSSTQVTVTTVAKPVHEPRYSLMESTS 779

Query: 518 FNSLPDISNLQCVTFDKKDFEQDDVSDV 601
            NS    S +     D  D E D++S++
Sbjct: 780 RNSYTSTSGV-----DTTDNETDELSNI 802


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,501,058
Number of Sequences: 53049
Number of extensions: 400335
Number of successful extensions: 976
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)