Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19i15
(714 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655701-1|ABG45861.1| 813|Drosophila melanogaster JXC1 protein. 172 3e-43
AY058444-1|AAL13673.1| 813|Drosophila melanogaster GH22790p pro... 172 3e-43
AE013599-1347|AAF58619.2| 813|Drosophila melanogaster CG8991-PA... 172 3e-43
U49793-1|AAB57632.1| 877|Drosophila melanogaster transcriptiona... 47 3e-05
BT001565-1|AAN71320.1| 877|Drosophila melanogaster RE16782p pro... 47 3e-05
AE014297-993|AAF54419.2| 877|Drosophila melanogaster CG9495-PA ... 47 3e-05
BT015235-1|AAT94464.1| 1688|Drosophila melanogaster RE05635p pro... 38 0.014
AJ276394-1|CAC01697.1| 1688|Drosophila melanogaster WOC protein ... 38 0.014
AE014297-4103|AAF56688.2| 1688|Drosophila melanogaster CG5965-PA... 38 0.014
AY058710-1|AAL13939.1| 1043|Drosophila melanogaster LD44304p pro... 33 0.29
BT029722-1|ABL75779.1| 108|Drosophila melanogaster IP17576p pro... 30 3.6
U62547-1|AAC47658.1| 1145|Drosophila melanogaster mitochondrial ... 29 6.3
U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase... 29 6.3
AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p pro... 29 6.3
AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA... 29 6.3
>DQ655701-1|ABG45861.1| 813|Drosophila melanogaster JXC1 protein.
Length = 813
Score = 172 bits (419), Expect = 3e-43
Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 15/147 (10%)
Frame = +2
Query: 317 ASRAKDASSPEQ---------SNEQKNKDECSWCNKGITSESGALQHA--GATFCSELCF 463
+SR +D+ SP ++E+ + C WC++ I + + G +CSE CF
Sbjct: 206 SSREEDSKSPHSIGKPVGAAHTDEKIDFSNCCWCHRPIAENAPDYLTSCDGPRYCSESCF 265
Query: 464 SQSRRANFKRAKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYKMHIFCRETQAHL 643
+QSRRA+FK+AKTCDWC+HVRH V+YVDFQDGA+QLQFCS+KCLNQYKM IFC ETQAHL
Sbjct: 266 AQSRRASFKKAKTCDWCKHVRHAVSYVDFQDGASQLQFCSEKCLNQYKMQIFCHETQAHL 325
Query: 644 DLNPHL----VNASSSSNLITPDLWLK 712
D++PHL ++A S + LITPDLWL+
Sbjct: 326 DMHPHLRDQAMDAGSEAGLITPDLWLR 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +2
Query: 179 NNSSTKTPPLGVKKE-NEEEIKDFAETAMNELLGWYGYE-----RLELRRWAASRAKDAS 340
N S+ P+ +KKE +EIK+FA MNELLGWYG+E RL+L + + A+
Sbjct: 54 NVGSSSAIPVQIKKELPSDEIKEFAHNTMNELLGWYGFEGVDVDRLDLTAKTSRLLQSAA 113
Query: 341 SPEQSNEQKNK 373
+ +N+Q ++
Sbjct: 114 AAAVANQQSHQ 124
>AY058444-1|AAL13673.1| 813|Drosophila melanogaster GH22790p
protein.
Length = 813
Score = 172 bits (419), Expect = 3e-43
Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 15/147 (10%)
Frame = +2
Query: 317 ASRAKDASSPEQ---------SNEQKNKDECSWCNKGITSESGALQHA--GATFCSELCF 463
+SR +D+ SP ++E+ + C WC++ I + + G +CSE CF
Sbjct: 206 SSREEDSKSPHSIGKPAGAAHTDEKIDFSNCCWCHRPIAENAPDYLTSCDGPRYCSESCF 265
Query: 464 SQSRRANFKRAKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYKMHIFCRETQAHL 643
+QSRRA+FK+AKTCDWC+HVRH V+YVDFQDGA+QLQFCS+KCLNQYKM IFC ETQAHL
Sbjct: 266 AQSRRASFKKAKTCDWCKHVRHAVSYVDFQDGASQLQFCSEKCLNQYKMQIFCHETQAHL 325
Query: 644 DLNPHL----VNASSSSNLITPDLWLK 712
D++PHL ++A S + LITPDLWL+
Sbjct: 326 DMHPHLRDQAMDAGSEAGLITPDLWLR 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +2
Query: 179 NNSSTKTPPLGVKKE-NEEEIKDFAETAMNELLGWYGYE-----RLELRRWAASRAKDAS 340
N S+ P+ +KKE +EIK+FA MNELLGWYG+E RL+L + + A+
Sbjct: 54 NVGSSSAIPVQIKKELPSDEIKEFAHNTMNELLGWYGFEGVDVDRLDLTAKTSRLLQSAA 113
Query: 341 SPEQSNEQKNK 373
+ +N+Q ++
Sbjct: 114 AAAVANQQSHQ 124
>AE013599-1347|AAF58619.2| 813|Drosophila melanogaster CG8991-PA
protein.
Length = 813
Score = 172 bits (419), Expect = 3e-43
Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 15/147 (10%)
Frame = +2
Query: 317 ASRAKDASSPEQ---------SNEQKNKDECSWCNKGITSESGALQHA--GATFCSELCF 463
+SR +D+ SP ++E+ + C WC++ I + + G +CSE CF
Sbjct: 206 SSREEDSKSPHSIGKPAGAAHTDEKIDFSNCCWCHRPIAENAPDYLTSCDGPRYCSESCF 265
Query: 464 SQSRRANFKRAKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYKMHIFCRETQAHL 643
+QSRRA+FK+AKTCDWC+HVRH V+YVDFQDGA+QLQFCS+KCLNQYKM IFC ETQAHL
Sbjct: 266 AQSRRASFKKAKTCDWCKHVRHAVSYVDFQDGASQLQFCSEKCLNQYKMQIFCHETQAHL 325
Query: 644 DLNPHL----VNASSSSNLITPDLWLK 712
D++PHL ++A S + LITPDLWL+
Sbjct: 326 DMHPHLRDQAMDAGSEAGLITPDLWLR 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +2
Query: 179 NNSSTKTPPLGVKKE-NEEEIKDFAETAMNELLGWYGYE-----RLELRRWAASRAKDAS 340
N S+ P+ +KKE +EIK+FA MNELLGWYG+E RL+L + + A+
Sbjct: 54 NVGSSSAIPVQIKKELPSDEIKEFAHNTMNELLGWYGFEGVDVDRLDLTAKTSRLLQSAA 113
Query: 341 SPEQSNEQKNK 373
+ +N+Q ++
Sbjct: 114 AAAVANQQSHQ 124
>U49793-1|AAB57632.1| 877|Drosophila melanogaster transcriptional
repressor protein protein.
Length = 877
Score = 46.8 bits (106), Expect = 3e-05
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 320 SRAKDASSPEQSNEQKNKDECSWCNKGITSESGAL--QHAGATFCSELCFSQSRRANFKR 493
S AS+ Q + C+WC +G L Q FCSE C ++ R+A K
Sbjct: 43 STTSPASTQRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYSKG 102
Query: 494 AKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYK 607
A C C +V +DGA +FCS C+N+++
Sbjct: 103 A--CTQCDNV--------IRDGAPNKEFCSIMCMNKHQ 130
>BT001565-1|AAN71320.1| 877|Drosophila melanogaster RE16782p
protein.
Length = 877
Score = 46.8 bits (106), Expect = 3e-05
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 320 SRAKDASSPEQSNEQKNKDECSWCNKGITSESGAL--QHAGATFCSELCFSQSRRANFKR 493
S AS+ Q + C+WC +G L Q FCSE C ++ R+A K
Sbjct: 43 STTSPASTQRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYSKG 102
Query: 494 AKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYK 607
A C C +V +DGA +FCS C+N+++
Sbjct: 103 A--CTQCDNV--------IRDGAPNKEFCSIMCMNKHQ 130
>AE014297-993|AAF54419.2| 877|Drosophila melanogaster CG9495-PA
protein.
Length = 877
Score = 46.8 bits (106), Expect = 3e-05
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 320 SRAKDASSPEQSNEQKNKDECSWCNKGITSESGAL--QHAGATFCSELCFSQSRRANFKR 493
S AS+ Q + C+WC +G L Q FCSE C ++ R+A K
Sbjct: 43 STTSPASTQRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYSKG 102
Query: 494 AKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYK 607
A C C +V +DGA +FCS C+N+++
Sbjct: 103 A--CTQCDNV--------IRDGAPNKEFCSIMCMNKHQ 130
>BT015235-1|AAT94464.1| 1688|Drosophila melanogaster RE05635p
protein.
Length = 1688
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 317 ASRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQHAGATFCSELCFSQSRRANFKRA 496
A ++A + + + C+ C I ++ L FC+E+C +R
Sbjct: 610 ARTVEEAETARLDRIESFRRRCADCEADINTDEKQLMWETMDFCNEVCLGSYQRT---IG 666
Query: 497 KTCDWCRHVRHTVAYVDF--QDGATQLQFCSDKCLNQYK 607
TC+ C+ ++A + + G QFC CLN +K
Sbjct: 667 STCETCKQEVSSIALGKYCVRFGFDVRQFCCAGCLNTFK 705
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +2
Query: 374 DECSWCN--KGITSESGALQHAGATFCSELCFSQSRRANFKRAKTCDWCRHV---RHTVA 538
D C CN K + E L+ FCS CFS + + A C C R +
Sbjct: 760 DVCGVCNNQKPVRVEM-LLEDREHYFCSNPCFSAFKFVSNVNADPCAMCSKYFERRSAES 818
Query: 539 YVDFQDGATQLQFCSDKCLNQY 604
Y + + + FCS C+N Y
Sbjct: 819 YTIYNEQQSPKVFCSRVCINVY 840
>AJ276394-1|CAC01697.1| 1688|Drosophila melanogaster WOC protein
protein.
Length = 1688
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 317 ASRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQHAGATFCSELCFSQSRRANFKRA 496
A ++A + + + C+ C I ++ L FC+E+C +R
Sbjct: 610 ARTVEEAETARLDRIESFRRRCADCEADINTDEKQLMWETMDFCNEVCLGSYQRT---IG 666
Query: 497 KTCDWCRHVRHTVAYVDF--QDGATQLQFCSDKCLNQYK 607
TC+ C+ ++A + + G QFC CLN +K
Sbjct: 667 STCETCKQEVSSIALGKYCVRFGFDVRQFCCAGCLNTFK 705
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +2
Query: 374 DECSWCN--KGITSESGALQHAGATFCSELCFSQSRRANFKRAKTCDWCRHV---RHTVA 538
D C CN K + E L+ FCS CFS + + A C C R +
Sbjct: 760 DVCGVCNNQKPVRVEM-LLEDREHYFCSNPCFSAFKFVSNVNADPCAMCSKYFERRSAES 818
Query: 539 YVDFQDGATQLQFCSDKCLNQY 604
Y + + + FCS C+N Y
Sbjct: 819 YTIYNEQQSPKVFCSRVCINVY 840
>AE014297-4103|AAF56688.2| 1688|Drosophila melanogaster CG5965-PA
protein.
Length = 1688
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 317 ASRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQHAGATFCSELCFSQSRRANFKRA 496
A ++A + + + C+ C I ++ L FC+E+C +R
Sbjct: 610 ARTVEEAETARLDRIESFRRRCADCEADINTDEKQLMWETMDFCNEVCLGSYQRT---IG 666
Query: 497 KTCDWCRHVRHTVAYVDF--QDGATQLQFCSDKCLNQYK 607
TC+ C+ ++A + + G QFC CLN +K
Sbjct: 667 STCETCKQEVSSIALGKYCVRFGFDVRQFCCAGCLNTFK 705
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +2
Query: 374 DECSWCN--KGITSESGALQHAGATFCSELCFSQSRRANFKRAKTCDWCRHV---RHTVA 538
D C CN K + E L+ FCS CFS + + A C C R +
Sbjct: 760 DVCGVCNNQKPVRVEM-LLEDREHYFCSNPCFSAFKFVSNVNADPCAMCSKYFERRSAES 818
Query: 539 YVDFQDGATQLQFCSDKCLNQY 604
Y + + + FCS C+N Y
Sbjct: 819 YTIYNEQQSPKVFCSRVCINVY 840
>AY058710-1|AAL13939.1| 1043|Drosophila melanogaster LD44304p
protein.
Length = 1043
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +2
Query: 374 DECSWCN--KGITSESGALQHAGATFCSELCFSQSRRANFKRAKTCDWCRHV---RHTVA 538
D C CN K + E L+ FCS CFS + + A C C R +
Sbjct: 115 DVCGVCNNQKPVRVEM-LLEDREHYFCSNPCFSAFKFVSNVNADPCAMCSKYFERRSAES 173
Query: 539 YVDFQDGATQLQFCSDKCLNQY 604
Y + + + FCS C+N Y
Sbjct: 174 YTIYNEQQSPKVFCSRVCINVY 195
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 443 FCSELCFSQSRRANFKRAKTCDWCRHVRHTVAYVDF--QDGATQLQFCSDKCLNQYK 607
FC+E+C +R TC+ C+ ++A + + G QFC CLN +K
Sbjct: 7 FCNEVCLGSYQRT---IGSTCETCKQEVSSIALGKYCVRFGFDVRQFCCAGCLNTFK 60
>BT029722-1|ABL75779.1| 108|Drosophila melanogaster IP17576p
protein.
Length = 108
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +2
Query: 326 AKDASSPEQSNEQKNKDECSWCNKGI-------TSESGALQHAGATFCSELCFSQSRRAN 484
+KD +P S ++E SW N T+ES + G FCS+ ++ R
Sbjct: 7 SKDKRNPNYSGGNSGEEEDSWMNSYYTCLVCMQTAESPRVSFCGHHFCSQCIYNWIRSQK 66
Query: 485 FKRAKTCDWCR 517
+ +AK C +C+
Sbjct: 67 Y-QAK-CPYCQ 75
>U62547-1|AAC47658.1| 1145|Drosophila melanogaster mitochondrial DNA
polymerase catalyticsubunit precursor protein.
Length = 1145
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 255 QP*TNFLAGTVTRGWSLGGGPPREQKTLPALNN 353
QP T FL G ++R GP +EQ+ LP N
Sbjct: 973 QPRTPFLGGRLSRALEADTGPEQEQRFLPTRIN 1005
>U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase
gamma protein.
Length = 1145
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 255 QP*TNFLAGTVTRGWSLGGGPPREQKTLPALNN 353
QP T FL G ++R GP +EQ+ LP N
Sbjct: 973 QPRTPFLGGRLSRALEADTGPEQEQRFLPTRIN 1005
>AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p protein.
Length = 1145
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 255 QP*TNFLAGTVTRGWSLGGGPPREQKTLPALNN 353
QP T FL G ++R GP +EQ+ LP N
Sbjct: 973 QPRTPFLGGRLSRALEADTGPEQEQRFLPTRIN 1005
>AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA
protein.
Length = 1145
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 255 QP*TNFLAGTVTRGWSLGGGPPREQKTLPALNN 353
QP T FL G ++R GP +EQ+ LP N
Sbjct: 973 QPRTPFLGGRLSRALEADTGPEQEQRFLPTRIN 1005
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,404,922
Number of Sequences: 53049
Number of extensions: 562851
Number of successful extensions: 2080
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2059
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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