Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19i14
(713 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 247 2e-64
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 169 8e-41
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 169 8e-41
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 166 5e-40
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 158 1e-37
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 131 2e-29
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 92 1e-17
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 91 2e-17
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 84 3e-15
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 78 2e-13
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 71 2e-11
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 58 2e-07
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 56 9e-07
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 40 0.046
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 40 0.061
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 38 0.25
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 38 0.25
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 35 2.3
UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=... 35 2.3
UniRef50_O31630 Cluster: YjcH protein; n=3; Bacillus|Rep: YjcH p... 33 9.2
UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p... 33 9.2
UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1; ... 27 9.6
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 247 bits (604), Expect = 2e-64
Identities = 116/198 (58%), Positives = 144/198 (72%), Gaps = 1/198 (0%)
Frame = +3
Query: 108 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 287
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 288 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 467
KMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHL
Sbjct: 60 KMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHL 119
Query: 468 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 647
IY+N VN IC +LK E F T V+ SVY+ TR+IL T+P +CSRV+ D++RFF
Sbjct: 120 IYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVANDDVRFF 179
Query: 648 DVTNA-RTHRGGVGDQLF 698
D ++ G GD +F
Sbjct: 180 DANVVDNNYQAGNGDTVF 197
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 169 bits (410), Expect = 8e-41
Identities = 85/196 (43%), Positives = 119/196 (60%)
Frame = +3
Query: 108 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 287
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 288 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 467
KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+
Sbjct: 60 KMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHI 119
Query: 468 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 647
IY N+ IC L+ +E F + T +V+ ++ A T +I+ PN +CSR + R +
Sbjct: 120 IYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPLYTDDRIW 179
Query: 648 DVTNARTHRGGVGDQL 695
VT+ G V +++
Sbjct: 180 SVTDENNVGGQVFNEM 195
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 169 bits (410), Expect = 8e-41
Identities = 78/180 (43%), Positives = 115/180 (63%)
Frame = +3
Query: 108 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 287
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 288 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 467
KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+
Sbjct: 60 KMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHM 119
Query: 468 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 647
IY+N EA +C L++ E F + T R+ ++ T +IL TNP +CS+V+ + R +
Sbjct: 120 IYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARIW 179
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 166 bits (403), Expect = 5e-40
Identities = 82/180 (45%), Positives = 107/180 (59%)
Frame = +3
Query: 108 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 287
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 288 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 467
KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+
Sbjct: 59 KMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHM 116
Query: 468 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 647
IY+ + N IC L+Y E F S +V+ VY T +L TNP FC+RV+ + R +
Sbjct: 117 IYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRSY 176
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 158 bits (383), Expect = 1e-37
Identities = 79/180 (43%), Positives = 104/180 (57%)
Frame = +3
Query: 108 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 287
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 288 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 467
KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+
Sbjct: 60 KMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHM 119
Query: 468 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 647
IY N E IC+ LK+TE F + V +Y+ T S+L+ NP+ FC+ VS LR F
Sbjct: 120 IYENLEKQKEICERLKFTEHFADRYKNV-QKLYSNTMSVLNMANPDHFCAEVSLTSLRQF 178
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 131 bits (316), Expect = 2e-29
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Frame = +3
Query: 108 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 281
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 282 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 461
+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L+
Sbjct: 60 IEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVL 119
Query: 462 HLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELR 641
HLIYNN A IC+ L+ E F S V+ +V + I+ T+P FCS V+ +++R
Sbjct: 120 HLIYNNRTAAAEICNQLRQQENFRSD---VVENVTSMAYRIIQITDPEAFCSVVASNDIR 176
Query: 642 FF 647
F
Sbjct: 177 SF 178
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 91.9 bits (218), Expect = 1e-17
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Frame = +3
Query: 153 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQ 326
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I +
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRIGSGVGPE 70
Query: 327 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICD 506
F M I + L+ +RI+IP +N+ + +M E+ +F+ IY ++ + +C
Sbjct: 71 FDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKFVFYSIYERQDLIAELCR 130
Query: 507 NLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVG 686
L E +T + SV + I+ NP +C ++R FD + V
Sbjct: 131 GLVSQEYYTDDVLAKLQSVVS---HIMGLINPAIYCRPEIIRDIRSFDNPPGNGVQTAVF 187
Query: 687 DQL 695
DQ+
Sbjct: 188 DQM 190
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 91.5 bits (217), Expect = 2e-17
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Frame = +3
Query: 129 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 299
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 300 PIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNN 479
I FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 62 EIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGE 119
Query: 480 EEA-----VNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 644
+ +C++L+ + +T ++ +Y+ I+ NP +C + + R
Sbjct: 120 SATEPTGLITQLCESLRSQDFYTDD---MLSDLYSVVAEIMSKINPAIYCRPILNNSSRS 176
Query: 645 FDVTN 659
F T+
Sbjct: 177 FGKTS 181
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 84.2 bits (199), Expect = 3e-15
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Frame = +3
Query: 123 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 284
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 285 SKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 461
K I DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 462 HLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRD-EL 638
+ IYN++E + +CD L E F Q + T +I+ NP+ C R++ + E
Sbjct: 123 YTIYNDKEKIKDLCDILMKQEFF---EQPAWAAFQITLNTIMGLVNPSMLCERLTTNKEN 179
Query: 639 RFFD 650
R F+
Sbjct: 180 RVFN 183
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 78.2 bits (184), Expect = 2e-13
Identities = 59/164 (35%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Frame = +3
Query: 153 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 317
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 318 DNQFKMTIARHLVGNKERGI---KRILIP-SATNYQEVFNLNSMMQAEQLIFHLIYNNEE 485
+ FKM + + LV E+ KR+LIP S + + + S+M E+ +F+ IY +E+
Sbjct: 72 NRSFKMLVGQSLVPYAEKSTDPGKRLLIPMSVDDVRLAVSSRSLM--ERFVFYTIYEDED 129
Query: 486 AVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPN-TFC 614
+ ICD + E S T SV SI++ PN FC
Sbjct: 130 KLKSICDEITNQEEIYS-TSDTWESVNFNINSIINMATPNRLFC 172
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +3
Query: 153 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDN- 323
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I +N
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEIPSGVNNT 75
Query: 324 QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 491
FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 76 SFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 89 MDHGNFMIEKEISYSINFSQDLLYKILNS 3
MD+G+F+IEKEISYSINFSQDLLYKILNS
Sbjct: 1 MDYGDFVIEKEISYSINFSQDLLYKILNS 29
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 56.0 bits (129), Expect = 9e-07
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Frame = +3
Query: 153 NRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS-KMVLPIFDEDDNQF 329
N CIF D P + + G +IC HL F++S + + + D +
Sbjct: 28 NECIFRYARENDKLNQTIDPGYNCSNYLSGLYICQKHLEDYFRLSLRKINQLEGTDQGRV 87
Query: 330 --KMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 503
++++ L N R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC
Sbjct: 88 FERLSVLSRLPHNYRN---RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKIC 144
Query: 504 DNLK 515
++K
Sbjct: 145 QDVK 148
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 40.3 bits (90), Expect = 0.046
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 68 IEKEISYSINFSQDLLYKILNS 3
IEKEISYS+N SQDLLYKIL +
Sbjct: 6 IEKEISYSVNVSQDLLYKILTT 27
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 39.9 bits (89), Expect = 0.061
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = -1
Query: 68 IEKEISYSINFSQDLLYKILNS 3
+E+EISYSINFSQDLLY +LN+
Sbjct: 19 LEREISYSINFSQDLLYILLNA 40
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 37.9 bits (84), Expect = 0.25
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -1
Query: 80 GNFMIEKEISYSINFSQDLLYKILNS 3
G IEKEISYSIN SQDLL+ IL S
Sbjct: 19 GVVTIEKEISYSINLSQDLLFIILES 44
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 37.9 bits (84), Expect = 0.25
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 68 IEKEISYSINFSQDLLYKILNS 3
+EKEISY+IN SQDLLY I NS
Sbjct: 3 LEKEISYTINLSQDLLYIIFNS 24
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1
Query: 71 MIEKEISYSINFSQDLLYKILNS 3
++EKEISY++N SQDLLY I ++
Sbjct: 3 IVEKEISYTVNVSQDLLYIIFDT 25
>UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=1;
Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
Cytosine-specific methyltransferase - Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
Length = 452
Score = 34.7 bits (76), Expect = 2.3
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Frame = +3
Query: 297 LPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEV----FNLNSMMQAE-QLIF 461
L FD+ + MTIA G++ + IK+ L PS + YQ++ FN N+ + +L
Sbjct: 244 LKAFDDLSSPLAMTIAEDAPGSRFKRIKK-LPPSESKYQKLMRKEFNKNNTTPSGLRLAN 302
Query: 462 HLIY--NNEEAVNVICDNLKYTEGFTSGTQRVIHSVYA-----TTRSILDTTNPN 605
H Y N + + V DN + + ++ R I ++YA T ++I+ +PN
Sbjct: 303 HSQYVINKFKKILVDIDNPIFQKEYSLSRGRTIPAIYANKIMNTKKAIMRVLDPN 357
>UniRef50_O31630 Cluster: YjcH protein; n=3; Bacillus|Rep: YjcH
protein - Bacillus subtilis
Length = 240
Score = 32.7 bits (71), Expect = 9.2
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 222 DAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSA 401
+ YH +G KRF ++V P D++ +++ R L+G+ ++ +A
Sbjct: 86 NTYHPEG---SKFSAYKRFIAHELV-PFADDEYPTYQIGYGRTLIGDSLGATVSLM--TA 139
Query: 402 TNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEGFTS-GTQRVIHSVYATTR 578
+Y +F N +MQ+ + H++ EAV D++K+ + GT+ V+ T
Sbjct: 140 LDYPNMFG-NIIMQSPYVDKHVL----EAVKQ-SDDIKHLSIYHQIGTKET--DVHTTDG 191
Query: 579 SILDTTNPNTFCSRVSRDELRFFD 650
+ILD T PN ++ +L +D
Sbjct: 192 NILDFTEPNRELKQLLEKKLSDYD 215
>UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p -
Drosophila melanogaster (Fruit fly)
Length = 407
Score = 32.7 bits (71), Expect = 9.2
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 393 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 527
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 224 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 268
>UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 937
Score = 27.1 bits (57), Expect(2) = 9.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 326 LIVVFVENGQNHF*HFKTFDEVAVADKPSVVMIRVGRTR*LVCYARV 186
+ ++ N HF + KT V D P++ +IR R ++C ++
Sbjct: 43 MFAIYGGNAPGHFDNPKTKTTRVVLDMPNITIIRSRRPNAIMCIIKI 89
Score = 24.2 bits (50), Expect(2) = 9.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 107 IVAVINMDHGNFMIEKEISYSINFSQDLLYKILNS 3
I+ +I + HGN YS+ SQ++L IL +
Sbjct: 83 IMCIIKIVHGNNSATSAGYYSLQKSQEMLKMILGN 117
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,245,666
Number of Sequences: 1657284
Number of extensions: 13573610
Number of successful extensions: 34373
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 33132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34335
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -