Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i14
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z82260-3|CAB05131.1|  346|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    29   4.4  
Z92834-1|CAB07382.1|  564|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z46381-5|CAD92392.1|  328|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p...    28   7.6  
U12966-3|AAA20614.1|  128|Caenorhabditis elegans Temporarily ass...    28   7.6  

>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +3

Query: 429 NSMMQAEQLIFHLIYNNEEAVNVICD--NLKYTEGFTSGTQRV-IHSVYATTRSILDTTN 599
           N  ++  + I  L YN+ +AVN I +  N    +G     QR  I++  +  R    T +
Sbjct: 265 NDPIRTREEIVSLFYNHIKAVNEIYEGTNFNGIKGLHFVIQRTSIYTPDSCDRGRAKTDS 324

Query: 600 PNTFCSRVSRDELRFFDVTNARTH 671
            N FC   + D   F ++ + R H
Sbjct: 325 DNPFCEE-NVDVSNFLNLNSQRNH 347


>Z82260-3|CAB05131.1|  346|Caenorhabditis elegans Hypothetical
           protein C32H11.4 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 123 VGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYH 233
           +GM P  + + + +FA+  S D    + SP  P+ Y+
Sbjct: 146 IGMQPHVLNITQDLFAADFSSDKVALFVSPADPNDYY 182


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +3

Query: 429 NSMMQAEQLIFHLIYNNEEAVNVICD--NLKYTEGFTSGTQRV-IHSVYATTRSILDTTN 599
           N  ++  + I  L YN+ +AVN I +  N    +G     QR  I++  +  R    T +
Sbjct: 265 NDPIRTREEIVSLFYNHIKAVNEIYEGTNFNGIKGLHFVIQRTSIYTPDSCDRGRAKTDS 324

Query: 600 PNTFCSRVSRDELRFFDVTNARTH 671
            N FC   + D   F ++ + R H
Sbjct: 325 DNPFCEE-NVDVSNFLNLNSQRNH 347


>Z92834-1|CAB07382.1|  564|Caenorhabditis elegans Hypothetical
           protein F39B2.1 protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 545 TRYTQRLRNYKKHSRHHKPEHVLFACVARRIAFFRRDQ 658
           T+      N ++H+RHH  E VL AC      F RRD+
Sbjct: 300 TQVADSKANLRRHARHHSGEKVL-ACPFCARFFSRRDK 336


>Z46381-5|CAD92392.1|  328|Caenorhabditis elegans Hypothetical
           protein M01F1.8a protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 629 RRIAFFRRDQRPNASRWCWRSIILT 703
           +R+ F  R+Q PN    CWR+ + T
Sbjct: 153 QRVKFVAREQAPNERGVCWRAALAT 177


>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
           protein C52B9.8 protein.
          Length = 1336

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/68 (20%), Positives = 36/68 (52%)
 Frame = +3

Query: 339 IARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKY 518
           IAR  + N++  I++++      Y+ + +     + +Q + +L+   ++ +  +CD LK 
Sbjct: 231 IAREEMKNEKNRIQKLIQEDEEGYRAMLD----EKKDQRLVYLLEQTDDYIKSLCDLLKQ 286

Query: 519 TEGFTSGT 542
            +  T+G+
Sbjct: 287 QQNATAGS 294


>U12966-3|AAA20614.1|  128|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 174 protein.
          Length = 128

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 566 RNYKKHSRHHKPEHVLFA 619
           +++KKH  H +PEHV +A
Sbjct: 72  KDHKKHMSHERPEHVEYA 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,415,490
Number of Sequences: 27780
Number of extensions: 341335
Number of successful extensions: 898
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)