Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19i13
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 37 0.017
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 34 0.089
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 31 0.63
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 30 1.9
Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical... 29 4.4
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.9
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 28 5.9
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 590 YIIVGGGTSGSVLASRLTEDKPKATVLVIEAG 685
+IIVG G++G VLA+RLTED P VL+IEAG
Sbjct: 40 HIIVGAGSAGCVLANRLTED-PSNRVLLIEAG 70
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 554 PKGHTTPLEEYDYIIVGGGTSGSVLASRLTEDKPKATVLVIEAGK 688
P + L +YD +IVGGG G A +L +KP+ V +IE K
Sbjct: 16 PPKKSVDLPKYDLVIVGGGIVGCATARQLLIEKPQLKVALIEKEK 60
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 34.3 bits (75), Expect = 0.089
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 584 YDYIIVGGGTSGSVLASRLTEDKPKATVLVIEA 682
YD I+VG G +G A + +++P +VLV+EA
Sbjct: 46 YDVIVVGAGLTGLTAARNIQQNRPGLSVLVLEA 78
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +2
Query: 326 KILWTFPGNLTEPFKKNGVNPTSEGSKLTERQKRFLLWSYPQSPLVDMIMQTMATNNYSP 505
K LW G L F PTS+GSK+ + S P+ L+ + NYSP
Sbjct: 3 KSLWLTLGALVILFSSTSSRPTSQGSKIVGGPHENIRDSTPRDKLIAHPDRQKRAENYSP 62
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 575 LEEYDYIIVGGGTSGSVLASRLTEDKPKATVLVIEAGK 688
++E+DY+++GGG+ G A R E +V +IE+G+
Sbjct: 4 VKEFDYLVIGGGSGGIASARRAREF--GVSVGLIESGR 39
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 575 LEEYDYIIVGGGTSGSVLASRLTEDKPKATVLVIEAGK 688
++E+DY+++GGG+ G A R E +V +IE+G+
Sbjct: 18 VKEFDYLVIGGGSGGIASARRAREF--GVSVGLIESGR 53
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 578 EEYDYIIVGGGTSGSVLASRLTEDKPKATVL 670
+ YD II+GGG +G A+ LT+ K VL
Sbjct: 13 QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVL 43
>Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 601
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 617 GSVLASRLTEDKPKATVLVIEAGKPEMLISDI 712
GS+L ++ E K K + VIE KPE L+ +
Sbjct: 555 GSLLVTKQAEQKSKGSSTVIETKKPEDLVQKL 586
>AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical
protein Y9C9A.16 protein.
Length = 392
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 578 EEYDYIIVGGGTSGSVLASRLTEDKPKATVLVIE 679
+ + ++VGGG G +AS+ T P ++ +IE
Sbjct: 38 KHFKLLVVGGGAGGLGIASKFTRKLPSGSLGIIE 71
>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical protein
W10C6.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 470 IMQTMATNNYSPKNSHDPFDFLRDS-YPLPKGHTTPLEEYDYIIVGGGTSGSVLASRLTE 646
+++ T PK+ ++P + + Y LP PLE+ I +GGG V S +E
Sbjct: 1265 VVEVDVTIVMKPKDGNEPIVYKEKAPYLLP-----PLEDLQSISIGGGNYQLVHISLQSE 1319
Query: 647 DKPKATVLVIEAGKPEMLI 703
D+ K ++ G+ +++
Sbjct: 1320 DQVKVMKDIMTIGQGRVML 1338
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 584 YDYIIVGGGTSGSVLASRLTEDKPKA 661
YD +IVGGG SG A RL + KA
Sbjct: 51 YDVVIVGGGPSGLSAAIRLRQLAEKA 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,739,805
Number of Sequences: 27780
Number of extensions: 349620
Number of successful extensions: 898
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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