Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i11
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.78 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.78 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.78 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   7.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.3  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 43  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 156
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 43  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 156
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 43  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 156
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 396 STLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLS-PSTALGP 530
           S +H++   ++ +N       LAK+   + + T +++    T  GP
Sbjct: 101 SFMHKKSFKNFVNNVAALDETLAKLGQYINYETDYYVCLAMTITGP 146


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 599 QQHPGQTFLRAARTRTGPVQTPARPKRGTRGE 504
           QQH  Q+  R  + RTG  +  +   + T GE
Sbjct: 24  QQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGE 55


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 510 PSTALGPSWCLYRPSTCTRCPKE 578
           PS   GP  CL       RC +E
Sbjct: 59  PSICCGPFGCLVGTPETLRCQRE 81


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 454 LDFTSAFEAQDERSLRWRVDGALTNYQILEV*AAGFHAN 338
           + F+S    +  RSL     GALT + ++     G H N
Sbjct: 353 IKFSSFGMLKISRSLLTSFGGALTTFLVILFQYGGIHGN 391


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 263 TGFGGLKTVKIL 298
           TG GGL+ +K+L
Sbjct: 217 TGLGGLQNIKVL 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,745
Number of Sequences: 336
Number of extensions: 3503
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)