Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19i11
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 145 3e-35
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 97 2e-20
SB_27978| Best HMM Match : HycH (HMM E-Value=0.12) 93 3e-19
SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 38 0.008
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 33 0.29
SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_50200| Best HMM Match : RVT_1 (HMM E-Value=0.044) 31 0.89
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08) 31 1.2
SB_53228| Best HMM Match : CITED (HMM E-Value=2.5) 31 1.2
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 31 1.2
SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8) 30 1.6
SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_4563| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 30 2.1
SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038) 30 2.1
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56796| Best HMM Match : CITED (HMM E-Value=1.2) 29 3.6
SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 3.6
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_58773| Best HMM Match : DUF834 (HMM E-Value=0.83) 29 4.8
SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3) 29 4.8
SB_51866| Best HMM Match : Pkinase (HMM E-Value=0) 28 6.3
SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 28 6.3
SB_9859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8) 28 8.3
SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40) 28 8.3
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 145 bits (352), Expect = 3e-35
Identities = 67/151 (44%), Positives = 94/151 (62%)
Frame = +2
Query: 245 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFI 424
MR+VVLTG GG +K+ K P +G+V+++V ACG+ F DL+ RQG PK P++
Sbjct: 39 MRSVVLTGHGGNNKIKVEKYARPKPMQGQVVVKVHACGVTFADLLQRQGHFPLAPKPPYV 98
Query: 425 LGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAI 604
GFEC+G +E++GE VT VG +V+ L Y W E V A+ Y +PE M+ + AI
Sbjct: 99 CGFECSGVVEELGEEVTGIDVGARVICLAPYGMWTEYACVDAKMCYVMPEAMTFEEGAAI 158
Query: 605 TTNYVVAYLLLFEMANLTPGKSLLVHSAGGG 697
Y+ A+L+LF + NL KS+LVH A GG
Sbjct: 159 PITYLTAHLILFHLGNLGLRKSVLVHMAAGG 189
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Frame = +2
Query: 266 GFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKT---PFILGFE 436
GF VK+ PE + V+++ ACG+N+ D+ +R G +S K P GFE
Sbjct: 22 GFTEGANVKLRNIPERDL----VVVKTFACGVNYADICIRWGLYESAKKFVGWPITPGFE 77
Query: 437 CAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNY 616
+G I+ GENVT F++G +V + +++E + VP ++ALP+ MS +A + T
Sbjct: 78 FSGVIQWKGENVTEFEIGQEVFGASLFGSYSECIRVPKNQLFALPKKMSKNEAAGLPTVA 137
Query: 617 VVAYLLLFEMANLTPGKSLLVHSAGGG 697
+ A+ FE+A+ PG +LVHSA GG
Sbjct: 138 LTAWYAFFELAHTRPGAWVLVHSAAGG 164
>SB_27978| Best HMM Match : HycH (HMM E-Value=0.12)
Length = 316
Score = 92.7 bits (220), Expect = 3e-19
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = +2
Query: 245 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFI 424
M+AV+ T GG +++ I P P + E EVLIRV LN D + R+G+ PP I
Sbjct: 28 MKAVLFTP-GGPESMYIGDAPRPKLKETEVLIRVHFTALNRADTLQRKGSYPPPPGESEI 86
Query: 425 LGFECAGEIEQVGENVT-NFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVA 601
LG E +G +E++G ++ GD+V+AL +AE +V +V +P+GMS DA
Sbjct: 87 LGLEVSGIVEELGSACNLGWRKGDKVMALVPGGGYAEFAAVQESHVMPIPKGMSQSDAAT 146
Query: 602 ITTNYVVAYLLLFEMANLTPGKSLLVHSAGGG 697
I ++ ++ LL + ++ G +L+H+ G G
Sbjct: 147 IPEVWLTSFQLLHLLGDIQQGDKVLIHAGGSG 178
>SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +2
Query: 329 EVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 508
+VLI++ A ++ + +R G+ P+ PF G AG I +G+ VT KVGD V L
Sbjct: 289 QVLIKLSAASVSPVETYIRSGSYARLPELPFTPGNYGAGIIHAIGDEVTKHKVGDHVYTL 348
Query: 509 PEYR-AWAELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHS 685
++AE V+ L + + + Y AY L PG+++LVH
Sbjct: 349 STLTGSYAEYTVCEEDNVFLLHSSLGFSEGANVGITYFTAYRALCHRLGAKPGETVLVHG 408
Query: 686 AGGG 697
A GG
Sbjct: 409 ASGG 412
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 VKILKKPEPTVGE-GEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVG 463
+ ++ +P P V EV+++V G+ +DL + +G + P +LG E +G + VG
Sbjct: 60 LSVITRPVPHVSNPSEVIVKVAYSGICDRDLQILEGEL--PAAKCVVLGHEFSGVVSDVG 117
Query: 464 ENVTNFKVGDQVVALP 511
+V N +GD+VV P
Sbjct: 118 SDVKNVSIGDRVVVNP 133
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 VKILKKPEPTV-GEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVG 463
+ ++ +P P V +V++++ ++ DL V +G ID ILG + G ++++G
Sbjct: 12 LSVITRPTPHVQSPRDVVVKIAYSAVSGTDLHVLEGRIDCAKS--IILGHQFVGIVKEIG 69
Query: 464 ENVTNFKVGDQVVALP 511
+V + VGD+VV P
Sbjct: 70 ADVQHVSVGDRVVINP 85
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 320 GEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVT-NFKVGDQ 496
G EVL++ + G+N D+ G K PF G E GE+ G++ F VG Q
Sbjct: 37 GPEEVLVKTRYAGINATDINHTAGRYKPWNKPPFDAGLEGLGEVVATGKDYKGKFSVG-Q 95
Query: 497 VVALPEYRAWAELVSVPAQYVYALP 571
V + +AE V++ + + +P
Sbjct: 96 PVMFMRFGGFAEYVTLTEKDIVPVP 120
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 329 EVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFK 484
EV I++ A G+ D G +D P ILG E G +E VGE VT K
Sbjct: 30 EVRIKILATGVCHTDAYTLSG-VDPEGLFPCILGHEGGGIVESVGEGVTKVK 80
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 416 PFILGFECAGEIEQVGENVTNFKVGDQVVALP 511
P +LG E +G I VGE V++ K GD+V P
Sbjct: 52 PMVLGHESSGVICAVGEGVSDLKEGDRVAIEP 83
>SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP-P*NW*HFRQLARFHQRIRSPR 423
Q PG+ + ART V AR R T EPP RP P R+LA++++ R+ +
Sbjct: 800 QEPGKQHPKPARTPVAAVPAAARDARITSPEPPATRPHPGRVEAGRRLAKWNRTNRAKK 858
>SB_50200| Best HMM Match : RVT_1 (HMM E-Value=0.044)
Length = 527
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 272 GGLKTVKILKKPE--PTVGEGEVLIRVKACGLN 364
GGLK LK+ P V EG V++++KACGL+
Sbjct: 301 GGLKGEYELKETFECPQVDEGSVVVKIKACGLD 333
>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
Length = 893
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/86 (19%), Positives = 34/86 (39%)
Frame = +2
Query: 440 AGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNYV 619
+G + + FK D+V + E V + P+G++ + A + N +
Sbjct: 175 SGVVTGANSTSSRFKTNDRVCGIMSPCRVGEKVRCKEARLMTQPQGLNGMQAATLPINII 234
Query: 620 VAYLLLFEMANLTPGKSLLVHSAGGG 697
+A+ +L + LL+H G
Sbjct: 235 LAWKILSRALSDKKSAFLLIHEGDTG 260
>SB_53228| Best HMM Match : CITED (HMM E-Value=2.5)
Length = 417
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V AR R T EPP RP
Sbjct: 148 QEPGKQLKEPARTPVAAVPAAARDARITSPEPPATRP 184
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V AR R T EPP RP
Sbjct: 1477 QEPGKQLKEPARTPVAAVPAAARDARITSPEPPATRP 1513
>SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8)
Length = 599
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V AR R T EPP RP
Sbjct: 405 QEPGKQHQEPARTPVAAVPAAARDARITSPEPPATRP 441
>SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V AR R T EPP RP
Sbjct: 264 QEPGKQHQEPARTPVAAVPAAARDARITSPEPPATRP 300
>SB_4563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1473
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V AR R T EPP RP
Sbjct: 1007 QEPGKQHQEPARTPVAAVPAAARDTRITSPEPPATRP 1043
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 325 GRGPDSRESLRPKLPRFDSSSGRHRLSTED 414
GRG D +R +LP DSS R S ED
Sbjct: 1055 GRGRDKGRQMRTRLPSIDSSRSMGRSSDED 1084
>SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038)
Length = 771
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP-P*NW*HFRQLARFHQRIRSPR 423
Q PG+ ART + AR R T EPP RP P R+LA++++ R+ +
Sbjct: 366 QEPGKQHQEPARTPVAALPAAARDARITSPEPPATRPHPGRVEAGRRLAKWNRTNRAKK 424
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V AR R T EPP RP
Sbjct: 1826 QEPGKQHQEPARTPVAAVPAAARDARITSLEPPATRP 1862
>SB_56796| Best HMM Match : CITED (HMM E-Value=1.2)
Length = 431
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ +ART + AR R T EPP RP
Sbjct: 22 QEPGKQRQESARTPVAALPAAARDARITSPEPPATRP 58
>SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 411 FGGESMAP*RTIKSWKFRPQAFTRIRTSPSPT 316
FG + +P TIKSW ++PQ TR +P T
Sbjct: 74 FGIDGTSP-PTIKSWCYKPQTVTRSSKTPVKT 104
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 590 PGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRPP 483
P Q F A +T P P G G PP+G PP
Sbjct: 207 PHQLFADAPPIQTSTSLPPMIPPVGMLGHPPMGAPP 242
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 330 SPSPTVGSGFLSILTVLRPPKPVSTTARI 244
+P PTV S +T + PP PV+TT +
Sbjct: 543 TPKPTVASRPSPAVTTVTPPSPVATTTAV 571
>SB_58773| Best HMM Match : DUF834 (HMM E-Value=0.83)
Length = 248
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -2
Query: 576 PSGSAYTY-WAGTDTSSAQARYSGRATTWSPTLKLVTFSPTCSISPAHSKPKMKGVFGGE 400
P+ +AY+ + GT T++ + Y G +TT + + + P+ ++S FGG
Sbjct: 132 PTTTAYSSGYRGTSTTTYSSGYRGTSTTTAYSSGSYSSCPSRTLSGCFPATS----FGGT 187
Query: 399 SMAP*RTIKSWKFRPQAFTRIRTSPSPTVGS 307
+ T + P A+TR SPS +G+
Sbjct: 188 TTT---TTPAATTTPSAYTRACGSPSSRIGA 215
>SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3)
Length = 220
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
+ PG+ ART V AR R T EPP RP
Sbjct: 22 KEPGKQHQEPARTPVAAVPAAARDARITSPEPPATRP 58
>SB_51866| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 948
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 351 AFTRIRTSPSPTVGSGFLSILTVLRPPKPVSTT 253
A TR+ + +PT+GS F +L P V+TT
Sbjct: 700 ATTRVTFNGTPTIGSSFTVASQLLTPDNTVATT 732
>SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 396 STLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLSP 512
S L +LL W + K ++ P RW WWL P
Sbjct: 240 SILGGKLLGIWIDLNVPKGVRITPFDP--RWMGAWWLGP 276
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 384 VRAPSTLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLSPSTALGP 530
+ +PS L+ S A L+K+ + ++SP+ + K + SP T P
Sbjct: 269 ILSPSPLNSGRSSIRAELTLIKTENMVQLSPLTSPSAKGYASPQTTTRP 317
>SB_9859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 28.3 bits (60), Expect = 6.3
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Frame = +2
Query: 323 EGEVLIRVKACGLNFQDLIVRQG----------AIDSPPKTPFILGFECAGEIEQVGENV 472
+ EVL++V A +N D+ +R+G + + P I G + +G + + G V
Sbjct: 28 DAEVLVKVHASSVNPIDVEMRRGYGTNLLNTWRKLVGVEEFPLICGRDFSGVVVKTGRRV 87
Query: 473 TNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEG-MSALDAVAITT 610
F+ G +V P + A AQY+ E + A A ITT
Sbjct: 88 RRFRPGMEVWGTPSVVS-AVSRGCHAQYLKVKQEELLKAWGATVITT 133
>SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 596 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 486
Q PG+ ART V A R T EPP RP
Sbjct: 761 QEPGKQHQEPARTPVAAVPAAAHDARITSPEPPATRP 797
>SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8)
Length = 1150
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 509 PEYRAWAELVSVPAQYVYALPEGMSALDAVAITTN 613
P RA +SV + +Y LPEG+ LD++ +T+N
Sbjct: 572 PPSRASMAFLSVHIR-LYPLPEGLKLLDSLLLTSN 605
>SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40)
Length = 956
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 586 GRHSFGQRVHVLGRYRHQLGP 524
G H+ G R+H LG H +GP
Sbjct: 497 GIHTLGSRIHTLGSGIHTIGP 517
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Frame = -3
Query: 593 HPGQTFLRAARTRTGPVQTPARPKRGTRGEP-----PLGRPP 483
HPG +R R + GP P P G P P G PP
Sbjct: 269 HPGPPGVRGRRGKRGPPGPPGPPNGGATPHPGAMPTPSGEPP 310
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,469,273
Number of Sequences: 59808
Number of extensions: 461530
Number of successful extensions: 1248
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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