Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i10
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 277 NRCRSPWTGSLNIRPQRRRLR 339
           N C  P T   NIR  R+RLR
Sbjct: 271 NDCAKPLTQIRNIRGPRKRLR 291


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
 Frame = -1

Query: 616 TAWGCPEGRWEWRRSDLRATDLRTFAAINNDTDLNMSLHSGVTYAASFSVCIWTTLMSRN 437
           T W  P+    W + +L   +L          D   +  + +T    F +C ++ L    
Sbjct: 416 TEW--PQLMKAWLKIELLVGNLGMRRNFRKKLDFIFTFITLLTIGLYFQLCEFSRLNFSV 473

Query: 436 DPLFPTSVMALRRGTGVAAAPCANTVSPDLRH-FSNASFAVEYSGFL 299
           + L    +M L R   + +  C+ TVS  +RH + N +F   ++G +
Sbjct: 474 EHL----LMELSRA--IDSVACSKTVSDGIRHYYVNVTFPHLFNGLV 514


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 370 HRARPPRRCLFSMP 411
           HRA+PP R L   P
Sbjct: 185 HRAKPPMRVLHQCP 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,175
Number of Sequences: 336
Number of extensions: 3152
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)