Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i10
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.0  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       24   3.4  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 468  TEKDAAYVTPECKDIFRSVSLFMAANVRKSV 560
            TEK   YV   C+D   SV+      +RK V
Sbjct: 1996 TEKAPKYVDVHCRDATDSVAQLYKQQIRKGV 2026


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 315 STAKEAFEKCLKSGLTVFAQGA-AATPVPLLN-AMTEVGKSGSLRDIKVVHMHTEKDAAY 488
           S  KEA E+       + A G  AA+ V LL     E GKS  ++ +K++H     +  Y
Sbjct: 6   SRDKEAIERSKNIDRALRADGERAASEVKLLLLGAGESGKSTIVKQMKIIH-----ETGY 60

Query: 489 VTPECK 506
              EC+
Sbjct: 61  SQEECE 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,686
Number of Sequences: 2352
Number of extensions: 13393
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)