Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i08
         (423 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    27   0.37 
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         24   2.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   3.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.0  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 77  SIPGEPILFTENEGVLLCSVDRPSI---VKMLSREFDTEALVNFEND-NCNVRIAKTFGA 244
           S P EPI+  +   + L  ++RP +   +  ++    + A+  FEND   +V +    G 
Sbjct: 41  SHPEEPIVVEKENNITLIGINRPKVRNAIDSITGRKLSAAIAEFENDPKADVGVLHGIGG 100

Query: 245 S 247
           S
Sbjct: 101 S 101


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 120 CCCAPSTDRL 149
           CCC PS++RL
Sbjct: 67  CCCVPSSERL 76


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +2

Query: 95  ILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAKTFGASKRKNTTRSD 274
           +L+  N    LCS   PS+V ++  +    AL    + N  +  +    ++ R+N+T + 
Sbjct: 288 LLYANNAAAKLCSPVFPSVVPLVPLDSYHPAL----DFNIRINSSTRRNSTTRQNSTTTA 343

Query: 275 DYESN-KQPDY 304
            Y  N  + DY
Sbjct: 344 LYRYNFAKADY 354


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 230 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSI 331
           K +G ++ +   R  D  S  Q D D D+ DF+I
Sbjct: 371 KQWGMNRLRMMNR--DSSSASQRDKDQDIDDFNI 402



 Score = 22.2 bits (45), Expect = 8.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 129 HNSTPSFSVNKMGSPGMLVSLVSVTTNSILLVKL 28
           H+  PS+S ++  S G+L    +    SI  VKL
Sbjct: 432 HDRKPSYSSSERSSTGILGGTAAYLPASINPVKL 465


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 230 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSI 331
           K +G ++ +   R  D  S  Q D D D+ DF+I
Sbjct: 372 KQWGMNRLRMMNR--DSSSASQRDKDQDIDDFNI 403



 Score = 22.2 bits (45), Expect = 8.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 129 HNSTPSFSVNKMGSPGMLVSLVSVTTNSILLVKL 28
           H+  PS+S ++  S G+L    +    SI  VKL
Sbjct: 433 HDRKPSYSSSERSSTGILGGTAAYLPASINPVKL 466


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,931
Number of Sequences: 2352
Number of extensions: 6376
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)