Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19i08
(423 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 30 0.79
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 1.4
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 1.4
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 29 1.8
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 2.4
U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 27 5.5
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 27 5.5
AF125964-5|AAP13765.1| 722|Caenorhabditis elegans Hypothetical ... 27 5.5
AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical ... 27 5.5
Z77670-3|CAE17973.1| 201|Caenorhabditis elegans Hypothetical pr... 27 7.3
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 27 7.3
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 26 9.7
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 26 9.7
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 26 9.7
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 26 9.7
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 29.9 bits (64), Expect = 0.79
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 168 RLSILTIDGLSTEHNSTPSFSVNKMGSPGMLVSLVSVTTNSILLVK 31
RL+I I GLS+ +STPS V++ P L S+V++ L +
Sbjct: 260 RLAIRKIYGLSSVDHSTPSSDVDRSKCPKHLDSVVAINDQEWLFFR 305
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical protein
R03E1.1 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 56 VTETNDTSIPGEPILFTENEGVLLCSVDRPSIVK 157
+T + SIPG I+ + GV+ ++RP +VK
Sbjct: 992 LTSNGNLSIPGHVIISADLNGVIKVMINRPRLVK 1025
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 56 VTETNDTSIPGEPILFTENEGVLLCSVDRPSIVK 157
+T + SIPG I+ + GV+ ++RP +VK
Sbjct: 992 LTSNGNLSIPGHVIISADLNGVIKVMINRPRLVK 1025
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
protein K06C4.15 protein.
Length = 1067
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 150 IDGLSTEHNSTPSFSVNKMGSPGML 76
I L T H STPS ++ SPGM+
Sbjct: 142 ISDLRTPHGSTPSTGTPRLSSPGMV 166
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 84 PENPFCLQKTRGCCCAPSTD 143
PEN FC + T G CC P D
Sbjct: 166 PENGFC-ETTTGFCCVPGVD 184
>U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical
protein K09E3.1 protein.
Length = 675
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 150 IDGLSTEHNSTPSFSVNKMGSPGML 76
I L T H STPS ++ SPGM+
Sbjct: 222 ISDLRTLHGSTPSTGTPRLSSPGMV 246
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 182 EALVNFENDNC-NVRIAKTFGASKRKNTTRSDDYESN 289
EA+ N ++DN + + KTFG + +++ SD+ SN
Sbjct: 39 EAVKNLKDDNVLSKALVKTFGLNSSSSSSLSDESSSN 75
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 272 DDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVE 379
+D ++ QP MD+SD S+ +VE+ +LT L E
Sbjct: 3 EDEKAGLQP---MDISDASVADVESKDFLTSLFDCE 35
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 272 DDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVE 379
+D ++ QP MD+SD S+ +VE+ +LT L E
Sbjct: 3 EDEKAGLQP---MDISDASVADVESKDFLTSLFDCE 35
>AF125964-5|AAP13765.1| 722|Caenorhabditis elegans Hypothetical
protein W03G1.6b protein.
Length = 722
Score = 27.1 bits (57), Expect = 5.5
Identities = 21/94 (22%), Positives = 41/94 (43%)
Frame = +2
Query: 11 FHPLVTNFTNKMEFVVTETNDTSIPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEAL 190
++ L+ N ME ++ +++ P N +LCS P+I L D L
Sbjct: 320 YYALLHRKRNGMEIILPMVRNSTNTAPP-----NVQNILCS---PTIHASLENNLDKSGL 371
Query: 191 VNFENDNCNVRIAKTFGASKRKNTTRSDDYESNK 292
+ ++D ++ + A +KN SD+ S++
Sbjct: 372 EDDDSDPSSISSSSDISARLKKNCVVSDESSSSR 405
>AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical
protein W03G1.6a protein.
Length = 726
Score = 27.1 bits (57), Expect = 5.5
Identities = 21/94 (22%), Positives = 41/94 (43%)
Frame = +2
Query: 11 FHPLVTNFTNKMEFVVTETNDTSIPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEAL 190
++ L+ N ME ++ +++ P N +LCS P+I L D L
Sbjct: 320 YYALLHRKRNGMEIILPMVRNSTNTAPP-----NVQNILCS---PTIHASLENNLDKSGL 371
Query: 191 VNFENDNCNVRIAKTFGASKRKNTTRSDDYESNK 292
+ ++D ++ + A +KN SD+ S++
Sbjct: 372 EDDDSDPSSISSSSDISARLKKNCVVSDESSSSR 405
>Z77670-3|CAE17973.1| 201|Caenorhabditis elegans Hypothetical
protein W05E10.5 protein.
Length = 201
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 194 NFENDNCNVRIAKTFGASKRKNTTRSDDYESNKQPD--YDMD 313
N +ND +V+ +K+F AS N T + Y D YD++
Sbjct: 98 NNKNDCKSVKTSKSFNASSMANHTMTKQYTEQNHNDQYYDVE 139
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 8 RFHPLVTNFTNKMEFVVTETNDTSIPGEPILFTENEG 118
R VT +T+ M+FV++E ++ F +EG
Sbjct: 135 RLEDTVTRYTDSMKFVISEEEHNNLIATSTQFLSHEG 171
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
Frame = +2
Query: 53 VVTETN-DTSIPGEPILFTEN------EGVLLCSVDRPS 148
V T N T++PG+P+ FT + GV+ CS R S
Sbjct: 646 VSTSVNKSTAVPGQPVFFTRDSPSRVPHGVISCSSPRSS 684
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 80 IPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIA-KTFGASKRK 256
I +PI G++LC ++ + +M + EF T + F D R+ K F A K
Sbjct: 295 IDEQPIYTRYKVGIMLCKNEQSTEEQMYNNEFSTPSFDEF-LDFLGQRVTLKGFEAYKGG 353
Query: 257 NTTRSD 274
TR D
Sbjct: 354 LDTRGD 359
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 80 IPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIA-KTFGASKRK 256
I +PI G++LC ++ + +M + EF T + F D R+ K F A K
Sbjct: 295 IDEQPIYTRYKVGIMLCKNEQSTEEQMYNNEFSTPSFDEF-LDFLGQRVTLKGFEAYKGG 353
Query: 257 NTTRSD 274
TR D
Sbjct: 354 LDTRGD 359
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 87 PGMLVSLVSVTTNSILLVKLVTSGWNLLC 1
PG L L+ NS++L+ L T+G NLLC
Sbjct: 188 PG-LSRLLLPRINSMVLLALTTTGLNLLC 215
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 87 PGMLVSLVSVTTNSILLVKLVTSGWNLLC 1
PG L L+ NS++L+ L T+G NLLC
Sbjct: 206 PG-LSRLLLPRINSMVLLALTTTGLNLLC 233
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
Frame = +2
Query: 53 VVTETN-DTSIPGEPILFTEN------EGVLLCSVDRPS 148
V T N T++PG+P+ FT + GV+ CS R S
Sbjct: 646 VSTSVNKSTAVPGQPVFFTRDSPSRVPHGVISCSSPRSS 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,474,235
Number of Sequences: 27780
Number of extensions: 154443
Number of successful extensions: 493
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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