Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i06
         (109 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   1.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    19   3.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    19   3.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    19   3.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    18   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 1.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 102 FGSKHSYL*YNVVVLFTNKYKFS**INGKL 13
           F + H YL   +V++  N+Y     +NG+L
Sbjct: 813 FNAAHCYLATELVLMLKNRYII---LNGRL 839


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 63  RQHYIINTNVY 95
           +QHY +N N+Y
Sbjct: 302 QQHYQMNQNMY 312


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 63  RQHYIINTNVY 95
           +QHY +N N+Y
Sbjct: 250 QQHYQMNQNMY 260


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 63  RQHYIINTNVY 95
           +QHY +N N+Y
Sbjct: 433 QQHYQMNQNMY 443


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 35  LNLYLFVNKTTTLY 76
           L LYLF+  T T+Y
Sbjct: 291 LCLYLFLIITLTIY 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,691
Number of Sequences: 336
Number of extensions: 251
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 16
effective length of database: 117,209
effective search space used:  2226971
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)