Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i03
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 477 STARY*STWLGTASFRKLLHGLLW 406
           S  RY + W GTA+ +  + GLL+
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 103 VLVYKQIALNILCDKLYVYRAWELVFEFSDALTL 2
           V+ YK+    +LC  L  Y A  LV  FS+ L +
Sbjct: 123 VIDYKRHKKRLLCYLLARYVALALVILFSEILVI 156


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 103 VLVYKQIALNILCDKLYVYRAWELVFEFSDALTL 2
           V+ YK+    +LC  L  Y A  LV  FS+ L +
Sbjct: 141 VIDYKRHKKRLLCYLLARYVALALVILFSEILVI 174


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 311 CCHVSHQHG 285
           C HV H HG
Sbjct: 13  CLHVQHSHG 21


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 198 KYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYM 305
           K+ + +TD   K  Y+A   I V L  +   ++ Y+
Sbjct: 132 KHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYV 167


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 361 CPWR*TLRLCGRRSKPQKPMK*F 429
           C W+  +  C +  KP+K +  F
Sbjct: 80  CDWKGKVNNCDKLEKPRKVLPNF 102


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = +3

Query: 372 LNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFV 527
           L A T+W     T     ++ +  F   +FS  +   V ++ +++  NF ++
Sbjct: 17  LKALTVWHVENPTYRLYKIFVVFSFAVTFFSAWICALVNYNVSEISENFYYL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,570
Number of Sequences: 336
Number of extensions: 3127
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)