Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i02
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.3  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 487 FVLFSIEIL*VCLTEPSSMFHS*TLLSLVQLYKPYF 380
           F++F    + VC T  +  +    +L ++QLY  YF
Sbjct: 189 FLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYF 224


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 487 FVLFSIEIL*VCLTEPSSMFHS*TLLSLVQLYKPYF 380
           F++F    + VC T  +  +    +L ++QLY  YF
Sbjct: 115 FLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYF 150


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 175 VHCRHVGGDVK*RSGVYSCLSTLVS 101
           +HC  VGG     SG  +  ST ++
Sbjct: 333 LHCAAVGGSANIMSGCSTSTSTNIN 357


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 320 YYFRLTY*VY*QFTICSA*YYALGLIFACTRI 225
           YY  + + V+    +C   +Y + L+F C  I
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,173
Number of Sequences: 336
Number of extensions: 3353
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)