Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19i02
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.0  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    24   3.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   3.4  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   7.9  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 102 ETNVLKQEYTPDLHLTSPPTCLQWTTV 182
           E   +  +YT D   T+P  CL+ TT+
Sbjct: 569 EFEFISPQYTVDKVATNPQNCLKQTTI 595


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
          protein.
          Length = 420

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 13 NETWQKLCFPKTGNTIRQLLKM 78
          N TWQ+  FP TG + + ++ +
Sbjct: 7  NYTWQQRSFPSTGTSSQSVVSI 28


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 13 NETWQKLCFPKTGNTIRQLLKM 78
          N TWQ+  FP TG + + ++ +
Sbjct: 7  NYTWQQRSFPSTGTSSQSVVSI 28


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 57  YSTITKDGRLKIWDTETNVLKQEYTPDLH 143
           Y+ I K+G +  +D   N      T D+H
Sbjct: 116 YAEIDKNGNIASFDNRGNTYNHSGTGDIH 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,552
Number of Sequences: 2352
Number of extensions: 13053
Number of successful extensions: 60
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)