Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h23
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    29   0.034
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 29.1 bits (62), Expect = 0.034
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 159 KRRKLNTSTSNDGTKSVPVDVYKRVVEFEEAEAHLR 266
           K+ KL++  SND TK   V +Y+R+ + ++A   L+
Sbjct: 127 KKGKLSSFESNDETKDGKVGLYERIQKLKKANPSLK 162


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -3

Query: 314 YVLACFIEKGSILISWTQ 261
           + +ACF+ +G + +SW +
Sbjct: 372 HAVACFLTRGDLWLSWEE 389


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 172 NLRRFLTAVTSSFPMFSFIQVYQIS 98
           N   F+TA+  + P+F+  + Y I+
Sbjct: 279 NFNDFVTALKDNVPVFAAARFYAIN 303


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 172 NLRRFLTAVTSSFPMFSFIQVYQIS 98
           N   F+TA+  + P+F+  + Y I+
Sbjct: 279 NFNDFVTALKDNVPVFAAARFYAIN 303


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 172 NLRRFLTAVTSSFPMFSFIQVYQIS 98
           N   F+TA+  + P+F+  + Y I+
Sbjct: 599 NFNDFVTALKDNVPVFAAARFYAIN 623


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,327
Number of Sequences: 336
Number of extensions: 2300
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)