Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19h23
(658 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061305-1|AAL28853.1| 616|Drosophila melanogaster LD21694p pro... 68 1e-11
AJ620304-1|CAF04333.1| 616|Drosophila melanogaster THO complex ... 68 1e-11
AE013599-3748|AAF47114.2| 616|Drosophila melanogaster CG2980-PA... 68 1e-11
AY058570-1|AAL13799.1| 553|Drosophila melanogaster LD26007p pro... 29 5.6
AJ271814-1|CAB72133.1| 553|Drosophila melanogaster Meso18E prot... 29 5.6
AE014298-2922|AAF49011.1| 553|Drosophila melanogaster CG14233-P... 29 5.6
BT010117-1|AAQ22586.1| 1483|Drosophila melanogaster GH01154p pro... 28 9.7
AE014296-1480|AAF50395.2| 1126|Drosophila melanogaster CG32352-P... 28 9.7
AE014296-1479|AAF50397.2| 1653|Drosophila melanogaster CG32352-P... 28 9.7
AE014296-1478|AAF50396.2| 1709|Drosophila melanogaster CG32352-P... 28 9.7
>AY061305-1|AAL28853.1| 616|Drosophila melanogaster LD21694p
protein.
Length = 616
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 444 KVRTRAGRDALHKEKQRVDSTHLLLQNLLYEADHLNKEVTKCLQFKSKDEEIDLVPLEEF 623
K + +AGRD LH EK +VD + L LQNLLYE HL KE+ +C +FKS+D ++L+ E+
Sbjct: 51 KHKIKAGRDKLHLEKCKVDLSRLQLQNLLYEVSHLKKEIVRCQKFKSRDTSLELLSEAEY 110
>AJ620304-1|CAF04333.1| 616|Drosophila melanogaster THO complex 5
protein.
Length = 616
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 444 KVRTRAGRDALHKEKQRVDSTHLLLQNLLYEADHLNKEVTKCLQFKSKDEEIDLVPLEEF 623
K + +AGRD LH EK +VD + L LQNLLYE HL KE+ +C +FKS+D ++L+ E+
Sbjct: 51 KHKIKAGRDKLHLEKCKVDLSRLQLQNLLYEVSHLKKEIVRCQKFKSRDTSLELLSEAEY 110
>AE013599-3748|AAF47114.2| 616|Drosophila melanogaster CG2980-PA
protein.
Length = 616
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 444 KVRTRAGRDALHKEKQRVDSTHLLLQNLLYEADHLNKEVTKCLQFKSKDEEIDLVPLEEF 623
K + +AGRD LH EK +VD + L LQNLLYE HL KE+ +C +FKS+D ++L+ E+
Sbjct: 51 KHKIKAGRDKLHLEKCKVDLSRLQLQNLLYEVSHLKKEIVRCQKFKSRDTSLELLSEAEY 110
>AY058570-1|AAL13799.1| 553|Drosophila melanogaster LD26007p
protein.
Length = 553
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 147 TAVKKRRKLNTSTSNDGTKSVPVDVYKR 230
T +KK+RK++TST D T ++ KR
Sbjct: 389 TTLKKKRKMSTSTDGDSTNYELIEYLKR 416
>AJ271814-1|CAB72133.1| 553|Drosophila melanogaster Meso18E protein
protein.
Length = 553
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 147 TAVKKRRKLNTSTSNDGTKSVPVDVYKR 230
T +KK+RK++TST D T ++ KR
Sbjct: 389 TTLKKKRKMSTSTDGDSTNYELIEYLKR 416
>AE014298-2922|AAF49011.1| 553|Drosophila melanogaster CG14233-PA
protein.
Length = 553
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 147 TAVKKRRKLNTSTSNDGTKSVPVDVYKR 230
T +KK+RK++TST D T ++ KR
Sbjct: 389 TTLKKKRKMSTSTDGDSTNYELIEYLKR 416
>BT010117-1|AAQ22586.1| 1483|Drosophila melanogaster GH01154p protein.
Length = 1483
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 117 IKLNMGKEEVTAVKKRRKLNTST--SNDGTKSVPVDVYKRVVEFEEAEAHLRPADKD 281
+ ++ E T + RK + + S +G++ +P D + FE+ E +LRP +D
Sbjct: 1186 LSMSQNGSEFTPKRPLRKARSRSKYSIEGSQDIPQDGGSSIQYFEDDEEYLRPPARD 1242
>AE014296-1480|AAF50395.2| 1126|Drosophila melanogaster CG32352-PC,
isoform C protein.
Length = 1126
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 117 IKLNMGKEEVTAVKKRRKLNTST--SNDGTKSVPVDVYKRVVEFEEAEAHLRPADKD 281
+ ++ E T + RK + + S +G++ +P D + FE+ E +LRP +D
Sbjct: 829 LSMSQNGSEFTPKRPLRKARSRSKYSIEGSQDIPQDGGSSIQYFEDDEEYLRPPARD 885
>AE014296-1479|AAF50397.2| 1653|Drosophila melanogaster CG32352-PA,
isoform A protein.
Length = 1653
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 117 IKLNMGKEEVTAVKKRRKLNTST--SNDGTKSVPVDVYKRVVEFEEAEAHLRPADKD 281
+ ++ E T + RK + + S +G++ +P D + FE+ E +LRP +D
Sbjct: 1356 LSMSQNGSEFTPKRPLRKARSRSKYSIEGSQDIPQDGGSSIQYFEDDEEYLRPPARD 1412
>AE014296-1478|AAF50396.2| 1709|Drosophila melanogaster CG32352-PB,
isoform B protein.
Length = 1709
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 117 IKLNMGKEEVTAVKKRRKLNTST--SNDGTKSVPVDVYKRVVEFEEAEAHLRPADKD 281
+ ++ E T + RK + + S +G++ +P D + FE+ E +LRP +D
Sbjct: 1412 LSMSQNGSEFTPKRPLRKARSRSKYSIEGSQDIPQDGGSSIQYFEDDEEYLRPPARD 1468
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,144,269
Number of Sequences: 53049
Number of extensions: 375863
Number of successful extensions: 1072
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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