Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h21
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   4.3  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   9.8  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         23   9.8  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         23   9.8  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         23   9.8  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         23   9.8  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   9.8  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   9.8  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 568 VSRIHHIVDD-ETEKVHGVPYGGKRVSKTLGLARTQIE 458
           ++R+H  ++D E+ ++    YG +R   T+GL +  +E
Sbjct: 508 LNRLHEFLEDPESPRLSDRQYGFRRGCSTIGLIQRVVE 545



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 263 RASKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIE 385
           RASK+    KLL+S +  +  +A  +  K++QK E  +L+E
Sbjct: 772 RASKA----KLLASVSESVMRYAAPVWSKELQKREPGRLLE 808


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 493 LHVYHHMGHHALSQSH 540
           LH +HH GHHA   +H
Sbjct: 348 LH-HHHPGHHAALHAH 362


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -3

Query: 170 RSCCICVR--RRPQRRCTLAPTRTPTSLLFISKILQNVLRTTN 48
           ++C  C+   RR +RR    P++     +F++++L  V  T N
Sbjct: 319 KTCVCCIESFRRRRRRDAFTPSKDDP--IFVNEMLHKVDLTVN 359


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 AINASPDMDLQQFRIEFMDKTTELNLRSCQP 481
           A+N  P +   QF ++FM   T L+L+   P
Sbjct: 88  ALNIRPTLTADQFGLDFMTSGT-LSLQGSYP 117


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 AINASPDMDLQQFRIEFMDKTTELNLRSCQP 481
           A+N  P +   QF ++FM   T L+L+   P
Sbjct: 88  ALNIRPTLTADQFGLDFMTSGT-LSLQGSYP 117


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 AINASPDMDLQQFRIEFMDKTTELNLRSCQP 481
           A+N  P +   QF ++FM   T L+L+   P
Sbjct: 88  ALNIRPTLTADQFGLDFMTSGT-LSLQGSYP 117


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 AINASPDMDLQQFRIEFMDKTTELNLRSCQP 481
           A+N  P +   QF ++FM   T L+L+   P
Sbjct: 88  ALNIRPTLTADQFGLDFMTSGT-LSLQGSYP 117


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 AINASPDMDLQQFRIEFMDKTTELNLRSCQP 481
           A+N  P +   QF ++FM   T L+L+   P
Sbjct: 106 ALNIRPTLTADQFGLDFMTSGT-LSLQGSYP 135


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 AINASPDMDLQQFRIEFMDKTTELNLRSCQP 481
           A+N  P +   QF ++FM   T L+L+   P
Sbjct: 106 ALNIRPTLTADQFGLDFMTSGT-LSLQGSYP 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,261
Number of Sequences: 2352
Number of extensions: 13377
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)