Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19h21
(595 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subuni... 30 7.1
AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone recepto... 30 7.1
AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein pr... 30 7.1
AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein. 30 7.1
AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein. 30 7.1
BC150330-1|AAI50331.1| 1030|Homo sapiens KRAB-A domain containin... 29 9.4
BC146667-1|AAI46668.1| 1029|Homo sapiens KRBA1 protein protein. 29 9.4
BC142722-1|AAI42723.1| 1029|Homo sapiens KRBA1 protein protein. 29 9.4
BC041587-1|AAH41587.1| 669|Homo sapiens KRBA1 protein protein. 29 9.4
BC033229-1|AAH33229.1| 669|Homo sapiens KRBA1 protein protein. 29 9.4
AB058765-1|BAB47491.2| 1070|Homo sapiens KIAA1862 protein protein. 29 9.4
>BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subunit
13-like protein.
Length = 2210
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 212 EKKAASAVSWRLA---KRSCCICVRRRPQRRCTLAPTRTPT 99
E+ A++ +W +R C C R + +RC + P R PT
Sbjct: 403 EEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPT 443
>AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone
receptor-associated protein complex 240 kDa
component-like protein.
Length = 2210
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 212 EKKAASAVSWRLA---KRSCCICVRRRPQRRCTLAPTRTPT 99
E+ A++ +W +R C C R + +RC + P R PT
Sbjct: 403 EEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPT 443
>AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein
protein.
Length = 1908
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 212 EKKAASAVSWRLA---KRSCCICVRRRPQRRCTLAPTRTPT 99
E+ A++ +W +R C C R + +RC + P R PT
Sbjct: 101 EEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPT 141
>AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein.
Length = 2210
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 212 EKKAASAVSWRLA---KRSCCICVRRRPQRRCTLAPTRTPT 99
E+ A++ +W +R C C R + +RC + P R PT
Sbjct: 403 EEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPT 443
>AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein.
Length = 1917
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 212 EKKAASAVSWRLA---KRSCCICVRRRPQRRCTLAPTRTPT 99
E+ A++ +W +R C C R + +RC + P R PT
Sbjct: 110 EEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPT 150
>BC150330-1|AAI50331.1| 1030|Homo sapiens KRAB-A domain containing 1
protein.
Length = 1030
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 465 CVRASPRVLLTRLPPYGTPCTFSVSSSTIW 554
CVR P L P GTP +FS SSST W
Sbjct: 448 CVRDGPS---RPLAPRGTPTSFSSSSSTDW 474
>BC146667-1|AAI46668.1| 1029|Homo sapiens KRBA1 protein protein.
Length = 1029
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 465 CVRASPRVLLTRLPPYGTPCTFSVSSSTIW 554
CVR P L P GTP +FS SSST W
Sbjct: 447 CVRDGPS---RPLAPRGTPTSFSSSSSTDW 473
>BC142722-1|AAI42723.1| 1029|Homo sapiens KRBA1 protein protein.
Length = 1029
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 465 CVRASPRVLLTRLPPYGTPCTFSVSSSTIW 554
CVR P L P GTP +FS SSST W
Sbjct: 447 CVRDGPS---RPLAPRGTPTSFSSSSSTDW 473
>BC041587-1|AAH41587.1| 669|Homo sapiens KRBA1 protein protein.
Length = 669
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 465 CVRASPRVLLTRLPPYGTPCTFSVSSSTIW 554
CVR P L P GTP +FS SSST W
Sbjct: 148 CVRDGPS---RPLAPRGTPTSFSSSSSTDW 174
>BC033229-1|AAH33229.1| 669|Homo sapiens KRBA1 protein protein.
Length = 669
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 465 CVRASPRVLLTRLPPYGTPCTFSVSSSTIW 554
CVR P L P GTP +FS SSST W
Sbjct: 148 CVRDGPS---RPLAPRGTPTSFSSSSSTDW 174
>AB058765-1|BAB47491.2| 1070|Homo sapiens KIAA1862 protein protein.
Length = 1070
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 465 CVRASPRVLLTRLPPYGTPCTFSVSSSTIW 554
CVR P L P GTP +FS SSST W
Sbjct: 488 CVRDGPS---RPLAPRGTPTSFSSSSSTDW 514
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,352,652
Number of Sequences: 237096
Number of extensions: 1807875
Number of successful extensions: 4402
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4362
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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