Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19h17
(430 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7JVK6 Cluster: GM27569p; n=9; Arthropoda|Rep: GM27569p... 98 6e-20
UniRef50_UPI00015B4E02 Cluster: PREDICTED: similar to translin; ... 68 1e-10
UniRef50_Q15631 Cluster: Translin; n=33; Eumetazoa|Rep: Translin... 66 4e-10
UniRef50_Q9SJK5 Cluster: Translin-like protein; n=6; Magnoliophy... 46 3e-04
UniRef50_Q55BS7 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A7PT54 Cluster: Chromosome chr8 scaffold_29, whole geno... 41 0.013
UniRef50_Q4UTW0 Cluster: Putative uncharacterized protein; n=3; ... 32 5.8
UniRef50_A7JSY3 Cluster: MscS family small conductance mechanose... 32 5.8
UniRef50_Q9UYF0 Cluster: Methyl-accepting chemotaxis protein; n=... 32 5.8
>UniRef50_Q7JVK6 Cluster: GM27569p; n=9; Arthropoda|Rep: GM27569p -
Drosophila melanogaster (Fruit fly)
Length = 235
Score = 98.3 bits (234), Expect = 6e-20
Identities = 46/107 (42%), Positives = 64/107 (59%)
Frame = +1
Query: 109 FSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEXGIAPACGKARLLFEKA 288
FS++QK +D QE+ E IR + +E++ S+EA LQ+IH I+ ACG AR E
Sbjct: 10 FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVELC 69
Query: 289 HDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
Y L + VP Y+ Y DHW F+TQR ++IAL I+LE G L +
Sbjct: 70 AQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVT 116
>UniRef50_UPI00015B4E02 Cluster: PREDICTED: similar to translin;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
translin - Nasonia vitripennis
Length = 306
Score = 67.7 bits (158), Expect = 1e-10
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = +1
Query: 154 ETIRTICKEVDQXSREATTVLQVIH--YXEXGIAPA--CGKARLLFEKAHDGYAXLKDAV 321
+ IR KE+++ SR+ LQ IH + E I A C K+R LFE Y L V
Sbjct: 84 QEIRNNVKEIEKISRDIVMTLQNIHNEHTEENIIVAQYCSKSRELFEGVRKHYEKLAAIV 143
Query: 322 PPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
P Y+ Y D W+ +TQR C+L +L ++LE +L +
Sbjct: 144 PHDQYYRYHDQWKSVTQRLCFLASLVVYLEVKVLVT 179
>UniRef50_Q15631 Cluster: Translin; n=33; Eumetazoa|Rep: Translin -
Homo sapiens (Human)
Length = 228
Score = 65.7 bits (153), Expect = 4e-10
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>UniRef50_Q9SJK5 Cluster: Translin-like protein; n=6;
Magnoliophyta|Rep: Translin-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 238
Score = 46.0 bits (104), Expect = 3e-04
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEXGIAPACGKARLL 276
+ K F F+ L++ L E IR + E++ +R L ++H I KA+
Sbjct: 12 LEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQSRP-IPEVIEKAKEK 70
Query: 277 FEKAHDGYAXLKDAVP--PTDYFXYQDHWRFMTQRYCYLIALTIWLEKGIL 423
Y L + + P Y+ Y WR TQ +A WLE G L
Sbjct: 71 IVDLKQYYGRLAEILEECPGQYYRYHGDWRSETQAVVSQLAFMHWLETGTL 121
>UniRef50_Q55BS7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 214
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/102 (22%), Positives = 48/102 (47%)
Frame = +1
Query: 109 FSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEXGIAPACGKARLLFEKA 288
F F + L+Q +L + I+ I +++ R+ + ++Q H ++ + KA
Sbjct: 5 FESFTEELEQDFQLRQNIKEIMTKIEPIDRKLSQMVQTYHQVNNTMSYQQLLEEIQPMKA 64
Query: 289 HDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEK 414
LK + P Y+ Y+D+W+F + + + + W+EK
Sbjct: 65 Q--IDQLKLLIKPVLYYKYRDYWKFSITQISFSLIFSYWVEK 104
>UniRef50_A7PT54 Cluster: Chromosome chr8 scaffold_29, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_29, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 312
Score = 40.7 bits (91), Expect = 0.013
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEXGIAPACGKARLL 276
+ K F F+ L++ L E +R I E++ +R L ++H + KA
Sbjct: 70 VEKQFESFRCQLEESGGLRERVRAIAMEIESATRLMHANLLLVHQSR-SVPEVLEKASSQ 128
Query: 277 FEKAHDGYAXLKDAVP--PTDYFXYQDHWRFMTQRYCYLIALTIWLEKGIL 423
Y L + P Y+ Y WR TQ L+ WLE G L
Sbjct: 129 IAVLKKLYNQLGVVLQECPGQYYRYHGEWRSETQTAVSLLTFMHWLETGNL 179
>UniRef50_Q4UTW0 Cluster: Putative uncharacterized protein; n=3;
Xanthomonas campestris pv. campestris|Rep: Putative
uncharacterized protein - Xanthomonas campestris pv.
campestris (strain 8004)
Length = 158
Score = 31.9 bits (69), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 246 CSGMWQSSSTLREGPRWIRXTER-CCTT 326
C+ W ++T+ PRW+R R CC+T
Sbjct: 12 CAVQWTKATTMPSKPRWVRRQSRVCCST 39
>UniRef50_A7JSY3 Cluster: MscS family small conductance
mechanosensitive ion channel; n=1; Mannheimia
haemolytica PHL213|Rep: MscS family small conductance
mechanosensitive ion channel - Mannheimia haemolytica
PHL213
Length = 1125
Score = 31.9 bits (69), Expect = 5.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 82 SDNELINKXFSDFQKNLDQXQELXETIRTI-CKEVDQXSREATTVLQ 219
+DN+ +NK D QK L Q E ++ + VD +++ATT LQ
Sbjct: 70 ADNQALNKSIQDSQKALKTSQHNLEKLKEVTIASVDNLTQKATTDLQ 116
>UniRef50_Q9UYF0 Cluster: Methyl-accepting chemotaxis protein; n=1;
Pyrococcus abyssi|Rep: Methyl-accepting chemotaxis
protein - Pyrococcus abyssi
Length = 374
Score = 31.9 bits (69), Expect = 5.8
Identities = 18/85 (21%), Positives = 37/85 (43%)
Frame = +1
Query: 31 LXNKIKEPRLLIKXVIMSDNELINKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATT 210
L ++ K+ I+ +I E IN+ Q+N+ +E+ E I+ + D +R A
Sbjct: 239 LADRSKKSAEEIRNLIEEMQENINRVIQAIQENVRVTEEVKEAIQNLIAAFDDIARRANE 298
Query: 211 VLQVIHYXEXGIAPACGKARLLFEK 285
++ GI ++L ++
Sbjct: 299 TANMVKELSEGIDEQANSVQMLVDR 323
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,004,875
Number of Sequences: 1657284
Number of extensions: 5500791
Number of successful extensions: 12039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12038
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -