Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19h17
(430 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78627-1|CAA55341.1| 228|Homo sapiens translin protein. 66 6e-11
BT019491-1|AAV38298.1| 228|Homo sapiens translin protein. 66 6e-11
BT019490-1|AAV38297.1| 228|Homo sapiens translin protein. 66 6e-11
BC002359-1|AAH02359.1| 228|Homo sapiens translin protein. 66 6e-11
AK222868-1|BAD96588.1| 228|Homo sapiens translin variant protein. 66 6e-11
AC018737-2|AAY14831.1| 228|Homo sapiens unknown protein. 66 6e-11
Y12563-1|CAA73150.1| 193|Homo sapiens protein ( H.sapiens gene ... 57 3e-08
>X78627-1|CAA55341.1| 228|Homo sapiens translin protein.
Length = 228
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>BT019491-1|AAV38298.1| 228|Homo sapiens translin protein.
Length = 228
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>BT019490-1|AAV38297.1| 228|Homo sapiens translin protein.
Length = 228
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>BC002359-1|AAH02359.1| 228|Homo sapiens translin protein.
Length = 228
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>AK222868-1|BAD96588.1| 228|Homo sapiens translin variant protein.
Length = 228
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>AC018737-2|AAY14831.1| 228|Homo sapiens unknown protein.
Length = 228
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 97 INKXFSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKAR 270
+++ F + Q L Q++ E IR + + ++Q +RE T+LQ +H I C KAR
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62
Query: 271 LLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
F LK P Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 63 EHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 115
>Y12563-1|CAA73150.1| 193|Homo sapiens protein ( H.sapiens gene
encoding translin, exon 2 (and joined CDS). ).
Length = 193
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 160 IRTICKEVDQXSREATTVLQVIHYXEX--GIAPACGKARLLFEKAHDGYAXLKDAVPPTD 333
IR + + ++Q +RE T+LQ +H I C KAR F LK P
Sbjct: 2 IRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQ 61
Query: 334 YFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
Y+ + +HWRF+ QR +L A ++LE L +
Sbjct: 62 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVT 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,206,972
Number of Sequences: 237096
Number of extensions: 858601
Number of successful extensions: 4947
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4947
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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