Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h17
         (430 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118870-1|AAM50730.1|  235|Drosophila melanogaster GM27569p pro...    98   4e-21
AE013599-1113|AAF58784.1|  235|Drosophila melanogaster CG11761-P...    98   4e-21
AY392453-1|AAQ84213.1|   89|Drosophila melanogaster translin pro...    58   4e-09

>AY118870-1|AAM50730.1|  235|Drosophila melanogaster GM27569p
           protein.
          Length = 235

 Score = 98.3 bits (234), Expect = 4e-21
 Identities = 46/107 (42%), Positives = 64/107 (59%)
 Frame = +1

Query: 109 FSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEXGIAPACGKARLLFEKA 288
           FS++QK +D  QE+ E IR + +E++  S+EA   LQ+IH     I+ ACG AR   E  
Sbjct: 10  FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVELC 69

Query: 289 HDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
              Y  L + VP   Y+ Y DHW F+TQR  ++IAL I+LE G L +
Sbjct: 70  AQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVT 116


>AE013599-1113|AAF58784.1|  235|Drosophila melanogaster CG11761-PA
           protein.
          Length = 235

 Score = 98.3 bits (234), Expect = 4e-21
 Identities = 46/107 (42%), Positives = 64/107 (59%)
 Frame = +1

Query: 109 FSDFQKNLDQXQELXETIRTICKEVDQXSREATTVLQVIHYXEXGIAPACGKARLLFEKA 288
           FS++QK +D  QE+ E IR + +E++  S+EA   LQ+IH     I+ ACG AR   E  
Sbjct: 10  FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVELC 69

Query: 289 HDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
              Y  L + VP   Y+ Y DHW F+TQR  ++IAL I+LE G L +
Sbjct: 70  AQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVT 116


>AY392453-1|AAQ84213.1|   89|Drosophila melanogaster translin
           protein.
          Length = 89

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 26/58 (44%), Positives = 33/58 (56%)
 Frame = +1

Query: 256 CGKARLLFEKAHDGYAXLKDAVPPTDYFXYQDHWRFMTQRYCYLIALTIWLEKGILAS 429
           CG AR   E     Y  L + VP   Y+ Y DHW F+TQR  ++IAL I+LE G L +
Sbjct: 1   CGLARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVT 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,640,919
Number of Sequences: 53049
Number of extensions: 251416
Number of successful extensions: 552
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)