Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h17
         (430 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical pr...    27   5.7  
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ...    27   7.5  

>Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 TTVLQVIHYXEXGIAPA 255
           TT+L V+HY + G+ PA
Sbjct: 653 TTILLVVHYLQCGVTPA 669


>Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 TTVLQVIHYXEXGIAPA 255
           TT+L V+HY + G+ PA
Sbjct: 650 TTILLVVHYLQCGVTPA 666


>Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 TTVLQVIHYXEXGIAPA 255
           TT+L V+HY + G+ PA
Sbjct: 653 TTILLVVHYLQCGVTPA 669


>Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 205 TTVLQVIHYXEXGIAPA 255
           TT+L V+HY + G+ PA
Sbjct: 650 TTILLVVHYLQCGVTPA 666


>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
            protein C42C1.4a protein.
          Length = 1259

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 5/31 (16%), Positives = 25/31 (80%)
 Frame = +1

Query: 91   ELINKXFSDFQKNLDQXQELXETIRTICKEV 183
            + +++  ++F+++ ++ +++ E++RT+C+++
Sbjct: 1074 QFVSERVAEFEEDSEKQKKMDESLRTMCRQI 1104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,077,681
Number of Sequences: 27780
Number of extensions: 128497
Number of successful extensions: 298
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)