Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h13
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   429   e-120
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   429   e-120
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   428   e-120
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   428   e-120
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   216   2e-56
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    32   0.66 
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    32   0.66 
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    31   2.0  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    31   2.0  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    31   2.0  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   8.1  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  429 bits (1058), Expect = e-120
 Identities = 194/225 (86%), Positives = 207/225 (92%), Gaps = 1/225 (0%)
 Frame = +2

Query: 14  WCHFVK-ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVH 190
           W   V  + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVH
Sbjct: 11  WKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVH 70

Query: 191 LVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 370
           LVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL
Sbjct: 71  LVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 130

Query: 371 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 550
           QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKW
Sbjct: 131 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKW 190

Query: 551 GFTKYERDEFXKLREEGRLANDGCIVQYRPEHGPLXAWRKVQAXI 685
           GFTKYER+ + +LR++ RL  DGC V+YRPEHGP+ AW K Q  +
Sbjct: 191 GFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 235


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  429 bits (1057), Expect = e-120
 Identities = 192/218 (88%), Positives = 205/218 (94%)
 Frame = +2

Query: 32  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 211
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 212 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 391
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 392 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 571
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 572 DEFXKLREEGRLANDGCIVQYRPEHGPLXAWRKVQAXI 685
           + + +LR++ RL  DGC V+YRPEHGP+ AW K Q  +
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 229


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  428 bits (1055), Expect = e-120
 Identities = 192/216 (88%), Positives = 204/216 (94%)
 Frame = +2

Query: 38  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 217
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 218 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 397
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 398 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 577
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 578 FXKLREEGRLANDGCIVQYRPEHGPLXAWRKVQAXI 685
           + +LR++ RL  DGC V+YRPEHGP+ AW K Q  +
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  428 bits (1055), Expect = e-120
 Identities = 192/216 (88%), Positives = 204/216 (94%)
 Frame = +2

Query: 38  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 217
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 218 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 397
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 398 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 577
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 578 FXKLREEGRLANDGCIVQYRPEHGPLXAWRKVQAXI 685
           + +LR++ RL  DGC V+YRPEHGP+ AW K Q  +
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  216 bits (528), Expect = 2e-56
 Identities = 124/220 (56%), Positives = 143/220 (65%), Gaps = 2/220 (0%)
 Frame = +2

Query: 32  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 211
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 212 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 385
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 386 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 565
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 566 ERDEFXKLREEGRLANDGCIVQYRPEHGPLXAWRKVQAXI 685
           ER+ + +LR++ RL  DGC V+YRPEHGP+ AW K Q  +
Sbjct: 156 ERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 195


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 447 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLXSCVKRAASLMTAA 623
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 624 LCSTA 638
           L  TA
Sbjct: 355 LAKTA 359


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 447 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLXSCVKRAASLMTAA 623
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 624 LCSTA 638
           L  TA
Sbjct: 355 LAKTA 359


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 2    LSRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 115
            +S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1106 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 2   LSRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 115
           +S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 513 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 2    LSRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 115
            +S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1106 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 236 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 96
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,954,097
Number of Sequences: 53049
Number of extensions: 831273
Number of successful extensions: 2502
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2501
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)