Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h09
         (232 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.019
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   0.32 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.55 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   0.73 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   0.97 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   1.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   3.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    19   5.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    19   5.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    19   5.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    19   5.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   5.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    19   5.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    19   6.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    19   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   9.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   9.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    19   9.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    19   9.0  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 0.019
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 11  LKVRCVAMAIVWPLWC 58
           LK R +  A +WPLWC
Sbjct: 560 LKSRGIRTAAIWPLWC 575



 Score = 19.0 bits (37), Expect = 6.8
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 51  CGVGPKSAAKHG 86
           CG GP   + HG
Sbjct: 467 CGFGPWKPSMHG 478


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 0.32
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -2

Query: 228 FFIIKFGIYLYTIFLVILVVI 166
           F II   +++YT+  VIL+++
Sbjct: 210 FAIIHLSVFVYTLVSVILIIM 230


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 0.55
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
 Frame = -3

Query: 209 VFIYTQFFW*YLL*LSTITHTFLH-NNSTLSLVY--------SKLSNTSMSVFCS 72
           +FI  + F+  LL +S   +  LH NN+T   +Y        SK+S   +  FC+
Sbjct: 132 IFITCELFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCA 186


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 0.73
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 79  NTDMEVLESLEYTSDNVELLC 141
           +TD++VL    ++  NV LLC
Sbjct: 234 STDIKVLGYQRHSKQNVALLC 254


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 0.97
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 65  EISCKTRTWKCW 100
           E SC TR W CW
Sbjct: 109 ETSC-TRYWTCW 119


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 128 TLSLVYSKLSNTSMSVFCS*FRSNTTTAKQSPLQHIA 18
           ++ +V+S ++NT++ V     R  T +   + L H+A
Sbjct: 60  SILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLA 96


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 128 TLSLVYSKLSNTSMSVFCS*FRSNTTTAKQSPLQHIA 18
           ++ +V+S ++NT++ V     R  T +   + L H+A
Sbjct: 60  SILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLA 96


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 11  LKVRCVAMAIVWPLWC 58
           L  R +    +WP+WC
Sbjct: 607 LVARGLGAEAMWPVWC 622


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 3.9
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -2

Query: 216 KFGIYLYTIFLVILVVIINYH-TYF 145
           K G+Y    F+V + +++  H TYF
Sbjct: 283 KDGVYNTLFFIVYVSLLLGPHPTYF 307


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 201 LYTIFLVILVVIINYHT 151
           L  I L ++++I+N HT
Sbjct: 59  LVQIILDVILLILNVHT 75


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 213 FGIYLYTIFLVILVVIINYHTYFFA 139
           FGI L  +F V  VVI+    +F A
Sbjct: 523 FGIVLLLMFGVSFVVIVITIFFFTA 547


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 204 YLYTIFLVILVVIINYHTYFF 142
           +LY+  L    +   +HTY F
Sbjct: 142 FLYSFDLFANGITFGWHTYIF 162


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 201 LYTIFLVILVVIINYHT 151
           L  I L ++++I+N HT
Sbjct: 59  LVQIILDVILLILNVHT 75


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 201 LYTIFLVILVVIINYHT 151
           L  I L ++++I+N HT
Sbjct: 379 LVQIILDVILLILNVHT 395


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 213 FGIYLYTIFLVILVVIINYHTYFFA 139
           FGI L  +F V  VVI+    +F A
Sbjct: 248 FGIVLLLMFGVSFVVIVITIFFFTA 272


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 19.0 bits (37), Expect = 6.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 34 GDCLAVVVLDRNQLQN 81
          GDC  VV  D+N   N
Sbjct: 49 GDCRDVVRCDKNSDNN 64


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.0 bits (37), Expect = 6.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 204 YLYTIFLVILVVIINYHT 151
           Y  ++F+V LVV+I  +T
Sbjct: 207 YSISVFMVPLVVLIFTYT 224


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 179 YLL*LSTITHTFLHNNSTLSLVYSKLSNTSMSVFCS 72
           YL+    +  + + +  TL  + S+L    ++VFC+
Sbjct: 75  YLVTFVIVLGSGVISKGTLLFMTSQLKPDKVTVFCN 110


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 179 YLL*LSTITHTFLHNNSTLSLVYSKLSNTSMSVFCS 72
           YL+    +  + + +  TL  + S+L    ++VFC+
Sbjct: 75  YLVTFVIVLGSGVISKGTLLFMTSQLKPDKVTVFCN 110


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 179 YLL*LSTITHTFLHNNSTLSLVYSKLSNTSMSVFCS 72
           YL+    +  + + +  TL  + S+L    ++VFC+
Sbjct: 75  YLVTFVIVLGSGVISKGTLLFMTSQLKPDKVTVFCN 110


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 179 YLL*LSTITHTFLHNNSTLSLVYSKLSNTSMSVFCS 72
           YL+    +  + + +  TL  + S+L    ++VFC+
Sbjct: 75  YLVTFVIVLGSGVISKGTLLFMTSQLKPDKVTVFCN 110


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 213 FGIYLYTIFLVILVVIINYHTYFF 142
           F + + TIF V     I+   YFF
Sbjct: 227 FEVQVLTIFGVSFYFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 213 FGIYLYTIFLVILVVIINYHTYFF 142
           F + + TIF V     I+   YFF
Sbjct: 223 FEVQVLTIFGVSFYFFISTFFYFF 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,232
Number of Sequences: 336
Number of extensions: 1396
Number of successful extensions: 24
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3213870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)