Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19h04
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.13 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   2.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.7  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 112 KQSQLDKIPLAVIDKGVDESNRVAEKPQVYESIDGDYNENRPNDTLSLEYSLFRFKNAAR 291
           KQS LD+  L   D  VD    + +KP   + IDG+ +     + + L  ++    +A +
Sbjct: 48  KQSVLDEARLRANDSSVDPEIDIEDKPA--QKIDGEDDSGLTEEEVVLSNAIAEGPDAEK 105

Query: 292 DFNRS 306
              R+
Sbjct: 106 ALQRA 110


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 162 YTLVYYC*RNLV*LRLFKYNVSIG 91
           YTL  +C   +V L    YN+S+G
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLG 192


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 162 YTLVYYC*RNLV*LRLFKYNVSIG 91
           YTL  +C   +V L    YN+S+G
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLG 192


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = -3

Query: 160 HPCLLLLEESCLVATV*IQCLDRVLQSNF 74
           + CL+ +E  C + +  ++ LD+++ + F
Sbjct: 190 YTCLIQIETQCEIVSDTLRNLDKIVTNGF 218


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 452 ASFQGVGTSSEFSI 411
           ASFQG+GT + + I
Sbjct: 245 ASFQGIGTDNVYLI 258


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 164 TNLIELQKNHKFTNRSTEI 220
           TN+I L +N  +  R T+I
Sbjct: 136 TNIISLVQNKDYVERDTDI 154


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 358 YPFPVISPHL 329
           YP+P++SP +
Sbjct: 172 YPYPILSPEM 181


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 358 YPFPVISPHL 329
           YP+P++SP +
Sbjct: 64  YPYPILSPEM 73


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 313 STPFPLDEVKSQE 351
           S  FP+ E+KSQE
Sbjct: 57  SEKFPIQELKSQE 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,620
Number of Sequences: 336
Number of extensions: 2389
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)