Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19h04
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY392974-1|AAS85913.1| 146|Homo sapiens immunoglobulin heavy ch... 30 4.3
DQ454386-1|ABE66470.1| 92|Homo sapiens immunoglobulin heavy ch... 30 5.7
DQ146365-1|AAZ38720.1| 373|Homo sapiens apolipoprotein B mRNA e... 30 5.7
BC038808-1|AAH38808.1| 373|Homo sapiens apolipoprotein B mRNA e... 30 5.7
AY430039-1|AAR38785.1| 103|Homo sapiens immunoglobulin heavy ch... 30 5.7
AJ306672-1|CAC84783.1| 112|Homo sapiens immunoglobulin heavy ch... 30 5.7
AJ306671-1|CAC84782.1| 109|Homo sapiens immunoglobulin heavy ch... 30 5.7
AF460462-1|AAM87833.1| 65|Homo sapiens immunoglobulin heavy ch... 30 5.7
AF174048-1|AAD53794.1| 114|Homo sapiens immunoglobulin heavy ch... 30 5.7
AF167664-1|AAF15492.1| 82|Homo sapiens immunoglobulin heavy ch... 30 5.7
DQ535300-1|ABF83243.1| 123|Homo sapiens circulating B cell anti... 29 7.6
DQ100918-1|AAZ08924.1| 116|Homo sapiens immunoglobulin heavy ch... 29 7.6
DQ100909-1|AAZ08915.1| 127|Homo sapiens immunoglobulin heavy ch... 29 7.6
AY062300-1|AAL65728.1| 115|Homo sapiens immunoglobulin heavy ch... 29 7.6
AJ347190-1|CAC87467.1| 82|Homo sapiens immunoglobulin heavy ch... 29 7.6
AF455553-1|AAL59372.1| 125|Homo sapiens anti-cardiolipin immuno... 29 7.6
DQ523858-1|ABI35370.1| 91|Homo sapiens immunoglobulin heavy ch... 29 10.0
AY781807-1|AAW29111.1| 139|Homo sapiens MK2 non allergic IgE He... 29 10.0
AM081900-1|CAL06046.1| 100|Homo sapiens immunoglobulin heavy ch... 29 10.0
AJ402454-1|CAC15741.1| 80|Homo sapiens immunoglobulin heavy ch... 29 10.0
AF167599-1|AAF15432.1| 76|Homo sapiens immunoglobulin heavy ch... 29 10.0
>AY392974-1|AAS85913.1| 146|Homo sapiens immunoglobulin heavy chain
protein.
Length = 146
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 225 VVISVDRFVNLWFF-CNSIRFVYTLVYYC*RNLV*LRLFKYNVSIGYCNQIS 73
V+IS DR VN + NS++ T +YYC R+ +R Y G Q+S
Sbjct: 79 VIISADRSVNTAYLQWNSLKTSDTAMYYCARHSEPVRFLTYLDRWGQGTQVS 130
>DQ454386-1|ABE66470.1| 92|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 92
Score = 29.9 bits (64), Expect = 5.7
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ +K S I S TI+ V G + IS D N L+ NS+R T V
Sbjct: 8 WVRQAPGKGLKWVSYISSSSSTIYYADSVKGRL--TISRDNAKNSLYLQMNSLRDEDTAV 65
Query: 150 YYC*RN 133
YYC R+
Sbjct: 66 YYCARS 71
>DQ146365-1|AAZ38720.1| 373|Homo sapiens apolipoprotein B mRNA
editing enzyme, catalytic polypeptide-like 3F protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 400 WHNDILNSDEVPTPWKDAVFNFEHSEYKIPKV 495
W N + N DE PWK +NF + K+ ++
Sbjct: 340 WENFVYNDDEPFKPWKGLKYNFLFLDSKLQEI 371
>BC038808-1|AAH38808.1| 373|Homo sapiens apolipoprotein B mRNA
editing enzyme, catalytic polypeptide-like 3F protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 400 WHNDILNSDEVPTPWKDAVFNFEHSEYKIPKV 495
W N + N DE PWK +NF + K+ ++
Sbjct: 340 WENFVYNDDEPFKPWKGLKYNFLFLDSKLQEI 371
>AY430039-1|AAR38785.1| 103|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 103
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 288 SCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLVYYC*RNLV 127
S I S TI+ V G IS D N L+ NS+R T VYYC R+LV
Sbjct: 37 SYISSSGSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAVYYCARDLV 89
>AJ306672-1|CAC84783.1| 112|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 112
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ T ++ CI S I+ V G IS D N L+ NS+R T V
Sbjct: 36 WVRQAPGTGLEWMRCISSSSSPIYYADSVKGRF--TISRDNAKNTLYLQTNSLRDEDTAV 93
Query: 150 YYC*R 136
YYC R
Sbjct: 94 YYCAR 98
>AJ306671-1|CAC84782.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 29.9 bits (64), Expect = 5.7
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W RR ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 36 WIRRAPGKGLEWISYISGSGNTIYYADSVEGRF--TISRDNAKNSLYLQMNSLRAEDTAV 93
Query: 150 YYC*RNLV 127
YYC R L+
Sbjct: 94 YYCARGLI 101
>AF460462-1|AAM87833.1| 65|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 65
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 282 IFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLVYYC*RNLV*LRLFKY 106
I S TI+ V G IS D N L+ NS+R T VYYC R ++ RL+ Y
Sbjct: 2 ISSSSSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAVYYCAR-VIAARLYYY 58
Query: 105 NVSI 94
+ +
Sbjct: 59 GMDV 62
>AF174048-1|AAD53794.1| 114|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 114
Score = 29.9 bits (64), Expect = 5.7
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 36 WVRQAPGKGLEWVSYISSSSSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 93
Query: 150 YYC*RN 133
YYC RN
Sbjct: 94 YYCARN 99
>AF167664-1|AAF15492.1| 82|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 82
Score = 29.9 bits (64), Expect = 5.7
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S+ TI+ V G IS D N L+ NS+R T V
Sbjct: 1 WGRQAPGKGLEWVSYISSSDNTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 58
Query: 150 YYC*RNL 130
YYC R L
Sbjct: 59 YYCARQL 65
>DQ535300-1|ABF83243.1| 123|Homo sapiens circulating B cell
antibody heavy chain variable region protein.
Length = 123
Score = 29.5 bits (63), Expect = 7.6
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 38 WVRQAPGKGLEWVSYISSSGSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 95
Query: 150 YYC*RNLV*LRLFKYN 103
YYC R+L + F ++
Sbjct: 96 YYCARDLTVTKKFWFD 111
>DQ100918-1|AAZ08924.1| 116|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 116
Score = 29.5 bits (63), Expect = 7.6
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 35 WVRQAPGKGLEWVSYISSSSSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 92
Query: 150 YYC*RNL 130
YYC R+L
Sbjct: 93 YYCARDL 99
>DQ100909-1|AAZ08915.1| 127|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 127
Score = 29.5 bits (63), Expect = 7.6
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 34 WVRQAPGKGLEWVSYISSSSSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 91
Query: 150 YYC*RNLV 127
YYC R +V
Sbjct: 92 YYCARGVV 99
>AY062300-1|AAL65728.1| 115|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 115
Score = 29.5 bits (63), Expect = 7.6
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 28 WVRQAPGKGLEWVSYISSSSSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 85
Query: 150 YYC*RNLV*LRLFKY 106
YYC R+ + R Y
Sbjct: 86 YYCARDFIAARGLGY 100
>AJ347190-1|CAC87467.1| 82|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 82
Score = 29.5 bits (63), Expect = 7.6
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S I+Q V G IS D N L+ NS+R T V
Sbjct: 7 WVRQAPGKGLEWVSSISSSSSYIYQADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 64
Query: 150 YYC*RNL 130
YYC R+L
Sbjct: 65 YYCARDL 71
>AF455553-1|AAL59372.1| 125|Homo sapiens anti-cardiolipin
immunoglobulin heavy chain protein.
Length = 125
Score = 29.5 bits (63), Expect = 7.6
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 36 WVRQAPGKGLEWVSYISSSGSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 93
Query: 150 YYC*RNLV*LRLFKYNVSIGYCNQ 79
YYC R+ R ++GY Q
Sbjct: 94 YYCARDTKTKRYSGSYTTLGYWGQ 117
>DQ523858-1|ABI35370.1| 91|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 91
Score = 29.1 bits (62), Expect = 10.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 7 WVRQAPGKGLEWVSYISSSSSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRDEDTAV 64
Query: 150 YYC*RNL 130
YYC R+L
Sbjct: 65 YYCARDL 71
>AY781807-1|AAW29111.1| 139|Homo sapiens MK2 non allergic IgE Heavy
chain IGHV3-21*01 protein.
Length = 139
Score = 29.1 bits (62), Expect = 10.0
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ SCI S I+ V G IS D N L+ NS+R T V
Sbjct: 36 WVRQAPGKGLEWVSCISSSSSYIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 93
Query: 150 YYC*R 136
YYC R
Sbjct: 94 YYCAR 98
>AM081900-1|CAL06046.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 29.1 bits (62), Expect = 10.0
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W RR ++ +S I S +I+ V G IS D N L+ NS+R T V
Sbjct: 39 WVRRAPGKGLEWASAISASSGSIYYADSVKGRF--TISTDNSKNTLYLQMNSLRAEDTAV 96
Query: 150 YYC 142
YYC
Sbjct: 97 YYC 99
>AJ402454-1|CAC15741.1| 80|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 80
Score = 29.1 bits (62), Expect = 10.0
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 6 WVRQAPGKGLEWVSYISSSGSTIYYADSVKGRF--TISRDNAKNSLYLQMNSLRAEDTAV 63
Query: 150 YYC*RNLV 127
YYC R+L+
Sbjct: 64 YYCARDLL 71
>AF167599-1|AAF15432.1| 76|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 76
Score = 29.1 bits (62), Expect = 10.0
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 327 WERRRFLTPIKISSCIFKSEQTIFQTQRVVGTVLVVISVDRFVN-LWFFCNSIRFVYTLV 151
W R+ ++ S I S TI+ V G IS D N L+ NS+R T V
Sbjct: 1 WVRQAPGKGLEWVSYISSSGTTIYYADSVKGRF--TISRDNAKNSLFLHMNSLRAEDTAV 58
Query: 150 YYC*RNLV*LRLFKY 106
YYC R + R F Y
Sbjct: 59 YYCARTGLAARPFDY 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,210,096
Number of Sequences: 237096
Number of extensions: 1343260
Number of successful extensions: 12006
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12006
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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