Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19h01
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q00732 Cluster: p48 protein; n=16; Nucleopolyhedrovirus... 275 7e-73
UniRef50_P24651 Cluster: p48 protein; n=7; Nucleopolyhedrovirus|... 208 9e-53
UniRef50_Q4KSY4 Cluster: P45; n=3; Nucleopolyhedrovirus|Rep: P45... 166 5e-40
UniRef50_A0EYY5 Cluster: P45; n=4; Nucleopolyhedrovirus|Rep: P45... 138 9e-32
UniRef50_Q7T9U6 Cluster: ORF_69; n=9; Granulovirus|Rep: ORF_69 -... 126 5e-28
UniRef50_O96205 Cluster: Putative uncharacterized protein PFB056... 38 0.29
UniRef50_Q54J65 Cluster: MAP kinase phosphatase; n=2; Dictyostel... 36 0.67
UniRef50_UPI00006CD33E Cluster: hypothetical protein TTHERM_0027... 35 2.1
UniRef50_A2DL85 Cluster: Dynein heavy chain family protein; n=2;... 34 2.7
UniRef50_A5E633 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A7JMK9 Cluster: Predicted protein; n=1; Francisella tul... 33 4.8
UniRef50_Q7RSR7 Cluster: Putative uncharacterized protein PY0028... 33 4.8
UniRef50_A5K516 Cluster: Putative uncharacterized protein; n=6; ... 33 4.8
UniRef50_Q9HBJ7 Cluster: Ubiquitin carboxyl-terminal hydrolase 2... 33 4.8
UniRef50_O15357 Cluster: Phosphatidylinositol-3,4,5-trisphosphat... 33 6.3
UniRef50_Q5CQQ4 Cluster: Possible 2 TPR domains at N-terminus; n... 33 8.3
UniRef50_Q55FL8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_Q22MF6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
>UniRef50_Q00732 Cluster: p48 protein; n=16;
Nucleopolyhedrovirus|Rep: p48 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 387
Score = 275 bits (674), Expect = 7e-73
Identities = 124/130 (95%), Positives = 126/130 (96%)
Frame = +2
Query: 284 FSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLA 463
FSIFLRDEFIKQVP FRTIMQYLQ YYNPTPAPDVD IMCQSCKPANKIQCFECKC+YLA
Sbjct: 88 FSIFLRDEFIKQVPHFRTIMQYLQKYYNPTPAPDVDAIMCQSCKPANKIQCFECKCKYLA 147
Query: 464 SSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFYNL 643
SSLSTLD GLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESD+INENNLITQIFVQFFYNL
Sbjct: 148 SSLSTLDAGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDIINENNLITQIFVQFFYNL 207
Query: 644 ICDKAYSLYT 673
ICDKAYSLYT
Sbjct: 208 ICDKAYSLYT 217
Score = 187 bits (455), Expect = 2e-46
Identities = 92/115 (80%), Positives = 95/115 (82%)
Frame = +1
Query: 22 MCAYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEF 201
MCAYRLQYSLRFN YDRFENVCFEAQLL+DEIDSLCFLFSKYFNQSLIVD KGLTFFTEF
Sbjct: 1 MCAYRLQYSLRFNIYDRFENVCFEAQLLQDEIDSLCFLFSKYFNQSLIVDSKGLTFFTEF 60
Query: 202 NKCIVSIKSSFENQANNTDNIHNVKNIFFDIFARRVHQTSAPI*DHYAILANILQ 366
NKCIVSIKSSFENQANNTDNIHNVKNI F IF R P H+ + LQ
Sbjct: 61 NKCIVSIKSSFENQANNTDNIHNVKNI-FSIFLRDEFIKQVP---HFRTIMQYLQ 111
>UniRef50_P24651 Cluster: p48 protein; n=7;
Nucleopolyhedrovirus|Rep: p48 protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 411
Score = 208 bits (508), Expect = 9e-53
Identities = 86/129 (66%), Positives = 110/129 (85%), Gaps = 1/129 (0%)
Frame = +2
Query: 290 IFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMC-QSCKPANKIQCFECKCRYLAS 466
+FLRDEFIKQVP F+TIM+YL+TYYNP PDV MC + C+P KI C CKC YL++
Sbjct: 93 MFLRDEFIKQVPHFKTIMEYLKTYYNPIAVPDVRAFMCDEQCRPGGKISCLTCKCNYLSA 152
Query: 467 SLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFYNLI 646
+L+TLD GLQ+GWDIFLRPMFGMPL++YV+ +TD+ ++ DV+NENNL+TQ+FVQFFYNL+
Sbjct: 153 ALTTLDSGLQDGWDIFLRPMFGMPLLIYVISKTDFSSQPDVVNENNLMTQMFVQFFYNLL 212
Query: 647 CDKAYSLYT 673
CDKAYS++T
Sbjct: 213 CDKAYSMHT 221
Score = 100 bits (240), Expect = 3e-20
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Frame = +1
Query: 22 MCAYRLQYSLRFNTYD----RFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTF 189
M Y+L Y+LRFN RFE+V FEAQ+ + EIDSL FL +KYF+Q ++D KGLTF
Sbjct: 1 MHTYKLLYNLRFNAVHGLEHRFEHVRFEAQMHQREIDSLTFLTAKYFDQHSLIDIKGLTF 60
Query: 190 FTEFNKCIVSIKSSFENQANNTDNIHNVKNI 282
FTEFNKCIV+IK+ FE Q +++N+H +K+I
Sbjct: 61 FTEFNKCIVAIKAKFEAQP-DSENLHGIKSI 90
>UniRef50_Q4KSY4 Cluster: P45; n=3; Nucleopolyhedrovirus|Rep: P45 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 378
Score = 166 bits (403), Expect = 5e-40
Identities = 73/131 (55%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Frame = +2
Query: 284 FSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEI--MCQSCKPANKIQCFECKCRY 457
FS+FL+DEF+ QVP+FRTIMQYLQ YY TPAP + ++ C+ C NKI+C CK Y
Sbjct: 86 FSVFLKDEFMSQVPKFRTIMQYLQKYYKSTPAPSIMQLNSKCEVCS-VNKIECLSCKINY 144
Query: 458 LASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFY 637
L+ SL+ D +Q+GWDIFLRPMFG+P+ LY++L+T+Y + + V N ++LIT F QFFY
Sbjct: 145 LSESLTVFDTAIQDGWDIFLRPMFGLPIFLYIILKTEY-DTNGVFNADDLITNSFTQFFY 203
Query: 638 NLICDKAYSLY 670
NL+CDKA + Y
Sbjct: 204 NLLCDKATTGY 214
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/97 (48%), Positives = 62/97 (63%)
Frame = +1
Query: 37 LQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIV 216
++Y+LRFN +D F+NV F L EIDSL FLFSKYF+QS V+ KGLTFF EFNKC+
Sbjct: 8 VEYTLRFNKFDSFQNVNFRVLLSTAEIDSLAFLFSKYFDQSTNVNIKGLTFFNEFNKCVD 67
Query: 217 SIKSSFENQANNTDNIHNVKNIFFDIFARRVHQTSAP 327
+K F+ + +N D VK I F +F + + P
Sbjct: 68 VVKQDFDRKQDNND----VKKI-FSVFLKDEFMSQVP 99
>UniRef50_A0EYY5 Cluster: P45; n=4; Nucleopolyhedrovirus|Rep: P45 -
Ecotropis obliqua NPV
Length = 397
Score = 138 bits (335), Expect = 9e-32
Identities = 61/127 (48%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Frame = +2
Query: 284 FSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEI--MCQSCKPANKIQCFECKCRY 457
FS+FL+ EF+ Q+P F+ IMQ+LQ Y +P + +I C C P N++ C CK Y
Sbjct: 88 FSMFLKHEFMGQIPNFKKIMQFLQKYLLTIDSPSISDINSTCNVC-PVNQLACLNCKILY 146
Query: 458 LASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFY 637
L++S+S D QNGWDIFLRPMFG+PL +Y+L++TDY N + + N ++L+T F FFY
Sbjct: 147 LSASISMFDINTQNGWDIFLRPMFGLPLFIYILMKTDYDN-NGIFNSDDLMTNAFATFFY 205
Query: 638 NLICDKA 658
NL+ DK+
Sbjct: 206 NLLSDKS 212
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 37 LQYSLRFNTYDR-FENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCI 213
++YSL+F + +NV F QL + EIDSL FLFSKY++QS V KGLTFF EFNKC+
Sbjct: 9 VKYSLQFRKNENDIKNVNFSVQLTKCEIDSLTFLFSKYYDQSKYVIVKGLTFFNEFNKCV 68
Query: 214 VSIKSSFENQANNTD 258
++K +F+++ +N +
Sbjct: 69 DAVKHNFDSKQDNNE 83
>UniRef50_Q7T9U6 Cluster: ORF_69; n=9; Granulovirus|Rep: ORF_69 -
Adoxophyes orana granulovirus (AoGV)
Length = 396
Score = 126 bits (304), Expect = 5e-28
Identities = 53/130 (40%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Frame = +2
Query: 284 FSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLA 463
F +F+ ++FI QVP F+ IM+ L YY + + C +C +K++C +C+ Y++
Sbjct: 103 FKLFVENDFIGQVPMFQIIMKNLLPYYKSIEKLENIQY-CDNCATKSKLECLKCRATYMS 161
Query: 464 SSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKN-ESDVINENNLITQIFVQFFYN 640
+LS LDE LQNGW++F RPM G+PL+ + L ++++K + DV N +N++T +QFFYN
Sbjct: 162 EALSLLDESLQNGWEVFYRPMLGIPLLFFALFKSEFKEIDEDVFNVDNIVTNTLLQFFYN 221
Query: 641 LICDKAYSLY 670
L+ DKA S +
Sbjct: 222 LLSDKATSCF 231
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 31 YRLQYSLRF------NTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFF 192
Y +QY L+F YD + V F L EID+L FL ++YFNQ + + LTFF
Sbjct: 17 YEIQYDLKFYKLCETKGYD-VKRVNFTCSLSLYEIDTLTFLLAEYFNQQHLFNFDKLTFF 75
Query: 193 TEFNKCIVSIKSSFENQANNTDNIHNVKNIFFD 291
+F I IK+ +E + + + + +F +
Sbjct: 76 NQFKYVIDVIKNDYEKKTESEAEVKQIFKLFVE 108
>UniRef50_O96205 Cluster: Putative uncharacterized protein PFB0560w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0560w - Plasmodium falciparum
(isolate 3D7)
Length = 3990
Score = 37.5 bits (83), Expect = 0.29
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -3
Query: 224 FMETIHLLNSVKKVRPLPSTIKLWLKYFENKKHNESISSRNNCASKHTF---SKRSYVLN 54
F E I++L KK + TI KYF KHN S S+ ++ S F +KR+ +LN
Sbjct: 97 FEENINVLKKKKKKKN-SDTINYNKKYFNKNKHNGSSSNEHSSYSDENFFEAAKRNKILN 155
Query: 53 LKLYCN 36
++Y N
Sbjct: 156 EEIYKN 161
>UniRef50_Q54J65 Cluster: MAP kinase phosphatase; n=2; Dictyostelium
discoideum|Rep: MAP kinase phosphatase - Dictyostelium
discoideum AX4
Length = 1543
Score = 36.3 bits (80), Expect = 0.67
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 28 AYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNK 207
AY ++ N+++ ++ F+ + L D D L L SKY + GK + + +N
Sbjct: 1403 AYLYRFIKEENSWEEYD--VFDCEDLAD--DGLFILISKYDRILYVWIGKDINYTQFYNS 1458
Query: 208 CIVSIKSSFENQANNTDNIHNVKN 279
I + +++F N N +NI+N N
Sbjct: 1459 FIKNNENNFNNSNNEINNINNNNN 1482
>UniRef50_UPI00006CD33E Cluster: hypothetical protein TTHERM_00276060;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00276060 - Tetrahymena thermophila SB210
Length = 983
Score = 34.7 bits (76), Expect = 2.1
Identities = 32/117 (27%), Positives = 48/117 (41%)
Frame = +1
Query: 124 LCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVKNIFFDIFAR 303
+ +L KY Q ++VD + + N I I N N +++ K IF +
Sbjct: 816 ISYLIQKYTTQQILVDFNAVQQDSVINILIEEI-----NLIKNISDLNEKKVIFTALMDI 870
Query: 304 RVHQTSAPI*DHYAILANILQSDAGTRRGRDHVSVVQARKQNSMFRVQMQILGVLAE 474
+ TSA +++L N + + GTRR R Q NSM Q L L E
Sbjct: 871 LFNNTSAISLQAFSLLLNAIIENLGTRRFRPARYTEQRDNLNSMGGSGFQRLSCLKE 927
>UniRef50_A2DL85 Cluster: Dynein heavy chain family protein; n=2;
Eukaryota|Rep: Dynein heavy chain family protein -
Trichomonas vaginalis G3
Length = 3932
Score = 34.3 bits (75), Expect = 2.7
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Frame = +2
Query: 311 IKQVPQFRTIMQYLQTYYNPTPAPDVDEI----MCQSCKPANKIQCFECKCRYLASSLST 478
IK + I + L Y+N +P+ DEI + + K F C ++ ++
Sbjct: 1555 IKDEKEKEQIDKTLLMYFNEPHSPNFDEIHRREIATELRATLKDLKFNCTHLFIDKIINV 1614
Query: 479 LDEGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDVINENNLITQIFVQFFYN 640
+ N I P +LR+ + + V+N++N I Q+++ YN
Sbjct: 1615 RSQYFNNRGVILYGPSCTGKSTALKILRSHFNMNAKVVNDDNKIQQVYIISIYN 1668
>UniRef50_A5E633 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 435
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 235 ENQANNTDNIHNVKNIFFDIFARRVHQTSAPI*DHYAILANILQSDAGTRRGRDHVSVVQ 414
E Q N + NVK + FD F++ + QTS I ++ + + AG R+ D + ++
Sbjct: 101 EKQNNKPTLVINVKGVDFDEFSKPIVQTSDKINKYFK--KQMKEDGAGVRKLTDELLIIS 158
Query: 415 ARKQNSMF 438
RK ++
Sbjct: 159 QRKYPELY 166
>UniRef50_A7JMK9 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 225
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 106 RDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVK 276
R E + C S+ F+ +D G F+E +C +S K SF++Q I++ K
Sbjct: 84 RSEKATGCAFLSRIFDVVENIDNTGCQIFSEPLRCFISYKKSFDDQKRLVQTIYDGK 140
>UniRef50_Q7RSR7 Cluster: Putative uncharacterized protein PY00287;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00287 - Plasmodium yoelii yoelii
Length = 1089
Score = 33.5 bits (73), Expect = 4.8
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 31 YRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKC 210
Y + Y L+ + FE C + LC+++ YF V+ K + F EF KC
Sbjct: 333 YSINYILKI--FSIFEKSCIVIKEEEQLHKLLCYIYYFYFYFVNDVNVKSIDFMNEFKKC 390
Query: 211 IVSIKSSFENQANNTDNIHNVK 276
+ + E A +N +N K
Sbjct: 391 ELMFNNKKELLAYLRENKYNTK 412
>UniRef50_A5K516 Cluster: Putative uncharacterized protein; n=6;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1740
Score = 33.5 bits (73), Expect = 4.8
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 290 IFLRDEFIK--QVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLA 463
IFL F K +P T+ Q L+ Y+ A D+ S +N C YL
Sbjct: 1240 IFLMKHFKKGEMMPFLTTVSQKLKKIYDQAVANGADDNNSSSNNNSNNNSIMVRNCIYLT 1299
Query: 464 SSLSTLDEGLQNGWDIFL 517
S+ +D+G+ D+FL
Sbjct: 1300 QSVLLIDKGVNLRNDLFL 1317
>UniRef50_Q9HBJ7 Cluster: Ubiquitin carboxyl-terminal hydrolase 29;
n=10; Eutheria|Rep: Ubiquitin carboxyl-terminal
hydrolase 29 - Homo sapiens (Human)
Length = 922
Score = 33.5 bits (73), Expect = 4.8
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -3
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>UniRef50_O15357 Cluster: Phosphatidylinositol-3,4,5-trisphosphate
5-phosphatase 2; n=24; Euteleostomi|Rep:
Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2
- Homo sapiens (Human)
Length = 1258
Score = 33.1 bits (72), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 QSLIVDGKGLTFFTEF-NKCIVSIKSSFENQANNTDNIHNVK 276
++++ FF EF + C+ K SFEN A ++DNI+ +K
Sbjct: 754 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 795
>UniRef50_Q5CQQ4 Cluster: Possible 2 TPR domains at N-terminus; n=2;
Cryptosporidium|Rep: Possible 2 TPR domains at
N-terminus - Cryptosporidium parvum Iowa II
Length = 1317
Score = 32.7 bits (71), Expect = 8.3
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 127 CFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSF--ENQANNTDNIHNVKNI 282
C L + +++ GK L + F+K ++ K++ EN++NN ++I ++N+
Sbjct: 120 CILLNPNWSKGWYRAGKALYYLNIFDKAVIVFKAALKRENESNNENSIKEIENL 173
>UniRef50_Q55FL8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1154
Score = 32.7 bits (71), Expect = 8.3
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = -3
Query: 233 KLLFMETIHLLNS--VKKVRPLPSTIKLWLKYFENKKHNESISSRNNCASKHTFSKRSYV 60
K+ + +I +++ +K + LP I L K+F+N K +S S NN +++ S++
Sbjct: 407 KISLLSSIFIIDDSDIKTISTLPFNICLASKFFQNSKSWKSESKINNNLIENSLMMPSFL 466
Query: 59 LNLKL--YC 39
N+K YC
Sbjct: 467 ENIKFIDYC 475
>UniRef50_Q22MF6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2171
Score = 32.7 bits (71), Expect = 8.3
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 338 IMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRYLASSLSTLDEGLQNGWDIF- 514
I +Y Q+ PTP D + K + K Q E + L L+ + E L N D
Sbjct: 849 IEKYRQSLM-PTPDKDTTKHFFNKTKKSQKDQVKEQGTKELEDHLANVQEALFNILDQGN 907
Query: 515 LRPMFGMPLMLYVLLRTDYKNESDVINENNLITQI-FVQFFY 637
+ + +P+ LY+L R ++ + D IN+ Q+ Q F+
Sbjct: 908 IYNIVKLPINLYLLTRIIHEIDQDQINQIKYFDQVSLYQLFF 949
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,084,434
Number of Sequences: 1657284
Number of extensions: 13210533
Number of successful extensions: 44042
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 40603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43986
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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