Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19g23
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78016-6|CAB01441.1|  336|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical p...    29   2.5  
AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z78016-6|CAB01441.1|  336|Caenorhabditis elegans Hypothetical
           protein R186.2a protein.
          Length = 336

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = -2

Query: 361 SSVY*TLSRLLTTPFFVNSTLIFSSRLDIFLPFFTTASHVR----IVLFCKLLNIINVSV 194
           S +Y  ++ ++  P F+  TLIF S L +F+ FF + SH+     ++L   LL++   S+
Sbjct: 13  SKIYEVINEIVY-PIFLTITLIFHSVLLVFIIFF-SPSHLNFLKFLLLTTSLLDVFATSI 70

Query: 193 L 191
           L
Sbjct: 71  L 71


>U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical
           protein C33F10.2 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = -2

Query: 355 VY*TLSRLLTTPFFVNSTLIFS-SRLDIFLPFFTTASHVRIVLFCKLLNI--------IN 203
           +Y T S +LT    +N++ +F  S +   L         R  ++C LL+I        +N
Sbjct: 414 LYETASNMLTVDHLLNASAVFGISSIISRLTNIGVIPTQRADVWCTLLDINETKWRDYLN 473

Query: 202 VSVLRESISSTTLE----KCFSIDSYMTT 128
           + VL    S   LE    +C   DSYMTT
Sbjct: 474 LDVLASHSSDRQLEVDIPRCHQYDSYMTT 502


>AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical
           protein T19A6.3b protein.
          Length = 142

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 256 TASHVRIVLFCKLLNIINVSVLRESISSTTLEKCFSIDSYMTTSIDFISC 107
           T   + IV+F  L+ +I        +    + +   ID ++TT +DF  C
Sbjct: 38  TRWRIAIVIFAVLVGVIGSKYFANELQKIEIFQIPMIDMFLTTHLDFTLC 87


>Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical
           protein B0250.4 protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 706 VKVAQIIVCNKCAQQXGRQTSKAFAKSKR 620
           +K   +I CNKC+ +   +TSK  A S++
Sbjct: 402 LKTENVIFCNKCSYEYFHETSKFLAHSQQ 430


>Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical
           protein T03F7.7b protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
 Frame = -1

Query: 290 VEIGYFFAIFYNC----VPRSNRVILQVAQHHKRVRFKRIN-----FVYHIGKMFFHRF 141
           ++  +FFA F N     V ++ + I+Q+ +H K + +++IN        +IGK  F RF
Sbjct: 33  IDSPFFFARFLNANNGDVEKTRQKIIQLFEHRKLMGYEKINDLDIFTTVNIGKDCFERF 91


>Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical
           protein T03F7.7a protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
 Frame = -1

Query: 290 VEIGYFFAIFYNC----VPRSNRVILQVAQHHKRVRFKRIN-----FVYHIGKMFFHRF 141
           ++  +FFA F N     V ++ + I+Q+ +H K + +++IN        +IGK  F RF
Sbjct: 33  IDSPFFFARFLNANNGDVEKTRQKIIQLFEHRKLMGYEKINDLDIFTTVNIGKDCFERF 91


>AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.7 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = +3

Query: 87  GHLNNELQEIKSILVVMYESMEKHFSNVV---DEIDSLKTDTFMMLSNLQNNTIRTWDAV 257
           GH+  E  E +  L    E +++  SN+    ++++    D    ++NL+ +     +  
Sbjct: 137 GHIIQEFHERELDLARNVEILQEENSNLTAKNEKLEETVDDLHEKVANLETSNKELTEIN 196

Query: 258 VKNGKKISNLDEKI 299
           V N +KISN  ++I
Sbjct: 197 VDNERKISNSSDEI 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,077,524
Number of Sequences: 27780
Number of extensions: 329474
Number of successful extensions: 989
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)