Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19g22
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0) 32 0.34
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 30 1.8
SB_41288| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_36099| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 29 2.4
SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_46289| Best HMM Match : DUF1690 (HMM E-Value=0.32) 29 2.4
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 29 2.4
SB_42927| Best HMM Match : Spore_permease (HMM E-Value=1.1) 29 2.4
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 29 2.4
SB_41570| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_4465| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_44023| Best HMM Match : COX6B (HMM E-Value=6.5) 29 3.2
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 29 3.2
SB_54936| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 4.2
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_8547| Best HMM Match : Amelogenin (HMM E-Value=8.1) 29 4.2
SB_59295| Best HMM Match : SET (HMM E-Value=0) 28 5.6
SB_46660| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_39717| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_9093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 5.6
SB_17045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_13945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 28 5.6
SB_44712| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 7.4
SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23) 28 7.4
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_8198| Best HMM Match : DUF1430 (HMM E-Value=3.3) 28 7.4
SB_47218| Best HMM Match : WD40 (HMM E-Value=8) 27 9.7
SB_47082| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_35669| Best HMM Match : CCT (HMM E-Value=9.1) 27 9.7
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_43079| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_32557| Best HMM Match : VWA (HMM E-Value=3.2e-39) 27 9.7
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0) 27 9.7
SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
Length = 584
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 66 KKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNE 194
KK +K K +EE+SD + + +DSGE+ PD++ E
Sbjct: 517 KKGKKEKQESESEEESDAEYELGTEDSSEDSGEESGPDSEDEE 559
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 63 IKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVN 242
+KK +K+K+ + SD SG G + + + + D E + + KP N
Sbjct: 127 VKKDKKKKNYSKEKGSSDNSGSGDKTTKPEKNDAKKKDKGDKPEKNYAKKKDKGDKPEKN 186
Query: 243 NTKKKRK 263
KKK K
Sbjct: 187 YAKKKNK 193
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 69 KMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTP 176
K +K+KSLK + D S +E DS EDW P
Sbjct: 49 KRKKKKSLKTGQSLFDASDSSSESS--TDSDEDWVP 82
>SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4)
Length = 176
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 105 EDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKR 260
+D + G GAE +E + G D + SRK++ +N K R
Sbjct: 121 DDDNDDGNGAEDDEDHEDGSGSESDGQGGRRPKKRSRKKIPHHKLNWNAKSR 172
>SB_41288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLVEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_36099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 75 RKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPV 239
R RKS ++ E S+ S G PE + T SNEP+ R + + + P V
Sbjct: 728 RWRKSTEVRAEPSENSEDGNFPETSSTNKSTSTTYPSSNEPSHRDTTESDAIPSV 782
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLDEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +3
Query: 57 IPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 236
+P + K+K KL +SD + ++ E+ + GE + + +P S++ + + P
Sbjct: 181 MPRSFLVKKKRAKLANGESDDPAELSQHEDAEADGESQNKEKRAEDPPSKSPDEERTDPN 240
Query: 237 VNNT 248
N+T
Sbjct: 241 PNST 244
>SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLVEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_46289| Best HMM Match : DUF1690 (HMM E-Value=0.32)
Length = 947
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +3
Query: 51 RTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK 230
R +P KR L EE+SDG+G+ + Q SG DW + + S+ + K
Sbjct: 31 RDLPQLAREKRHDL---EEESDGAGKDQDSSVHQYSG-DWVEEESGSGAESQFTDANPFK 86
Query: 231 PPVNNTKKKRK 263
K +RK
Sbjct: 87 GESKREKHRRK 97
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 102 EEDSDGSGQGAEPEEFQDS--GEDWTPDADSNEPASRT--SRKRVSKPPVNNTKKKR 260
+ED D G+ ++ + +D GE +P ADS EP S T +K K + KK+
Sbjct: 395 DEDEDHDGEKSDEADHRDEADGEGSSPTADSPEPDSPTKPGQKVKKKKSFKDALKKK 451
>SB_42927| Best HMM Match : Spore_permease (HMM E-Value=1.1)
Length = 670
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 114 DGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 263
DG E E+++ G+ W + P +VSK N +KK+K
Sbjct: 524 DGYIPQDEVEKYESKGKQWVNSIPNQPPGMAVEPVKVSKNQKKNERKKQK 573
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 1313 KQKQELNRSDRDESSQTTRGLDEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 1371
Query: 246 T 248
+
Sbjct: 1372 S 1372
>SB_41570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLDEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLVEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLVEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_4465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSQTTRGLVEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_44023| Best HMM Match : COX6B (HMM E-Value=6.5)
Length = 269
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGS-----GQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +LN D D S G EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELNRSDRDESSRTTRGLDEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 78 KRKSLKLNEEDSDG----SGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 236
+RKS K+ DSDG G G + + +S +D + + + + ++K+ K P
Sbjct: 176 RRKSAKVISSDSDGEDDRDGNGEQSKSGSESDDDEEEEEEEEKEEKKLTQKKKGKTP 232
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 102 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTS 212
EE+ +G G+G +D GE D +S P+S T+
Sbjct: 261 EEEEEGEGEGGYVSSKEDGGEGEEDDQESYLPSSPTN 297
>SB_54936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 138 PEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 263
P+ G++ TP +SN RT+ + +P TKKKRK
Sbjct: 105 PKPTPFKGQEETPKPESNSDR-RTTSESAGEPKKKKTKKKRK 145
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 60 PIKKMRKRKSLKLNEE-DSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 236
PIKK++KRK K + + + S ++ E DS + + + + K+ K
Sbjct: 736 PIKKVKKRKETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKHKKKKKRKKKIKKNRKKT 795
Query: 237 VNNTKKKRKN 266
+ N K KN
Sbjct: 796 MENESKNEKN 805
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 45 FSRTIPIKKMRKRKSLKLNEEDSDGSGQGAEP--EEFQD--SGEDWTPD-ADSNEPASRT 209
F R +PI +MR+R S K+ D + + EE + S E T D D N+ +S+
Sbjct: 1413 FGRALPILRMRQRGSAKIARFDPSKTVHNLKKFREEVTEEASCEQLTWDLRDENQASSK- 1471
Query: 210 SRKRVSKPPVNNTKKKR 260
R S+ NN+ +K+
Sbjct: 1472 -EVRTSRKSANNSSQKK 1487
>SB_8547| Best HMM Match : Amelogenin (HMM E-Value=8.1)
Length = 201
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 520 SIFHKFSSSSFDITVSPSHFTSDFSKTKFPEWKCFG 413
+++H +S S V P HFT+ FS + + CFG
Sbjct: 106 AMYHPYSPRS--ALVHPGHFTTIFSPDGYTGYPCFG 139
>SB_59295| Best HMM Match : SET (HMM E-Value=0)
Length = 1230
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 RGSVSLS-YFSRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEP 197
+G+VS + S PI + S+ L E+ S G ++ GED D DSN P
Sbjct: 884 KGTVSTAALISEMKPIHTLDVNTSIGLEEDTSQNCGDHSKKGS---EGEDTPMDIDSNSP 940
Query: 198 ASRTS 212
+ S
Sbjct: 941 SETVS 945
>SB_46660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 510 TSSVHQVLILQYLHPILHLISARQNFLNGNALVHLSIDLNQICFHRIR 367
TSS+H VL++QYL ++ RQ L N ++ + ++ +C +R
Sbjct: 54 TSSLH-VLVIQYLSLMVSFSKKRQFTLTDNIMMLVVYEILSVCRSNMR 100
>SB_39717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 99 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTK 251
+EE+S S + +E E +DS E+W+ + T ++R+ K + K
Sbjct: 40 SEEESSSSEEESEDESDEDSVENWSEQLTHFDLEDFTGQQRLKKTVSEDAK 90
>SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +3
Query: 102 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNE-------PASRTSRKRVSKPPVNNTKKKR 260
+++ GSG GAE +E + ED D ++ E P+ + + ++++P N K
Sbjct: 462 DDNKIGSGSGAEVDEEDEPEEDEEDDEETKEAKPIIQTPSKKETTSKLAEPVTNPVKSVA 521
Query: 261 K 263
K
Sbjct: 522 K 522
>SB_9093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 523 PSIFHKFSSSSFDITVSPSHFTSDFSKTKFPEWK-CF 416
PS+F SS PS FTS S F EW+ CF
Sbjct: 75 PSVFTSLQSSQAFSLHKPSVFTSLQSSQAFKEWRLCF 111
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 78 KRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKK 257
K K + E+++ S G + E+ +DS ++ D DS+ AS T++++ + T +
Sbjct: 1532 KEKKKRKKEDEATRSDDGTD-EKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLE 1590
Query: 258 R 260
R
Sbjct: 1591 R 1591
>SB_17045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 51 RTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPAS 203
R + M+KRK + + E DSDGS +PE ++S + + A+ EP+S
Sbjct: 196 RKAAVGGMKKRKRVMI-ESDSDGSDD-FKPES-EESDDSVSSGAEEEEPSS 243
>SB_13945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +3
Query: 78 KRKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVN 242
+ K +L D D S Q EP D+TPD PAS SRK++S N
Sbjct: 96 RSKKQELTRSDRDESSQTTRGLDEEPGPSHSRSADYTPDHSDKAPAS-ASRKKLSDHGYN 154
Query: 243 NT 248
+
Sbjct: 155 ES 156
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +3
Query: 66 KKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDA----DSNEPA-SRTSRKRVSK 230
++MR+R++ +EED DG +G E + GE+ +A DS E + SRKR+
Sbjct: 511 RRMRERRAYS-SEED-DGEEEGLGDLESDNEGEERLMNAKEGKDSEEESIEEPSRKRLLS 568
Query: 231 PPVNNTKKKRK 263
NT+K++K
Sbjct: 569 E--GNTRKEKK 577
>SB_44712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 30 VSLSYFSRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPAS 203
+S S +P+K++ KSL + +++ GQG E E+ +D+ D D D + S
Sbjct: 695 ISTSLAIEGVPVKQVPHTKSLGVLIDENLSWGQGREVEDEEDN--DKGDDGDEGDDGS 750
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 78 KRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRK 218
K++S NE+ S QGA + Q G D T DA + +R +
Sbjct: 129 KQQSKSENEKSSGPESQGANSLQSQQGGHDITLDAGQPKAPAREQER 175
>SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23)
Length = 299
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 99 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK 230
+EE+S S + +E E +DS E+W+ + T ++R+ K
Sbjct: 40 SEEESSSSEEESEDESDEDSVENWSEQLTHFDLEDFTGQQRLKK 83
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +3
Query: 57 IPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 236
I K + +K+ KL +DS +E EE D G + + S + P
Sbjct: 513 IKTKPAKSKKAFKLKSDDS------SEDEESSDDGPRGSKSKKHKKRCVSDSDSELEDSP 566
Query: 237 VNNTKKKRK 263
V KKKRK
Sbjct: 567 VAPKKKKRK 575
>SB_8198| Best HMM Match : DUF1430 (HMM E-Value=3.3)
Length = 211
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 606 PPRIHTCTFV*NSFHLIPLG*ISVIMLCHQFSTSSVHQVLIL 481
PPRIHT + S+ I + ++CHQ SV + +
Sbjct: 94 PPRIHTHRLIQTSYRYISSNIAVLAIMCHQIIWLSVAMAMFV 135
>SB_47218| Best HMM Match : WD40 (HMM E-Value=8)
Length = 82
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 541 NLSQWNQMERVLHKCTCVYSGWNVDN 618
N+ W+QM + + C C+Y + DN
Sbjct: 56 NICVWHQMVQDMASCICIYREFGSDN 81
>SB_47082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 171 TPDADSNEPASRTSRKRVSKPPVNNTKKKRK 263
TP +++ +SRTSR+ ++P TK+KRK
Sbjct: 482 TPKSNTTHSSSRTSRQAKTEP--RETKRKRK 510
>SB_35669| Best HMM Match : CCT (HMM E-Value=9.1)
Length = 101
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 81 RKSLKLNEEDSDGSGQGA-----EPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 245
++ +L+ D D S Q EP D+TPD PAS SRK++S N
Sbjct: 21 KQKQELSRSDRDESSQTTRGLVEEPGPSHSRSADYTPDHSEQAPAS-ASRKKLSDHGYNE 79
Query: 246 T 248
+
Sbjct: 80 S 80
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 444 LLKSDVKWDGDTVISKLDELNL---WKIDGKALLQ 539
+L+ D +D DT++ K+D+L W GKAL Q
Sbjct: 3720 VLRLDSSYDKDTLLKKIDDLPYLRGWTYTGKALDQ 3754
>SB_43079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 45 FSRTIPIKKMRKRKSLKLNEEDSDGSG-QGAEPEEFQDSGED 167
FSR + IKK + K + +E SDG G + E +E + ED
Sbjct: 300 FSRVLRIKKKKVDKDKEKAKEKSDGEGKKKKEKKEKSEKTED 341
>SB_32557| Best HMM Match : VWA (HMM E-Value=3.2e-39)
Length = 177
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 444 LLKSDVKWDGDTVISKLDELNL---WKIDGKALLQ 539
+L+ D +D DT++ K+D+L W GKAL Q
Sbjct: 51 VLRLDSSYDKDTLLKKIDDLPYLRGWTYTGKALDQ 85
>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1706
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 625 CHGCQHSTQNTHMYIC 578
C GCQH+TQ H C
Sbjct: 363 CKGCQHNTQGDHCQNC 378
>SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 132 AEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 263
++ E +DS ++ D+DS E + S+KR SK NT+K ++
Sbjct: 319 SQHHEDEDSEVEFEGDSDSEEEKPK-SKKRKSKTKERNTEKAQQ 361
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 KKMRKRKSLKLNEEDSDG-SGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVN 242
+K RKR + +++D D S ++F + +D+ D D ++ T +++K N
Sbjct: 322 EKHRKRNKVSDDDDDDDDHSHHDDNDDKFHYNDDDYDADGDDDKRHKVTKFGKITKSAKN 381
Query: 243 NTKKK 257
T K
Sbjct: 382 VTVNK 386
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,164,540
Number of Sequences: 59808
Number of extensions: 354348
Number of successful extensions: 1582
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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