Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19g21
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    30   0.87 
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    30   0.87 
Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z73974-2|CAA98271.2|  713|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AY079165-1|AAL86012.1|  585|Caenorhabditis elegans NADPH-depende...    27   4.6  
AL132858-12|CAB60480.1|  585|Caenorhabditis elegans Hypothetical...    27   4.6  
U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC006833-11|AAU87801.1|  175|Caenorhabditis elegans Enhancer of ...    27   8.1  

>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 29.9 bits (64), Expect = 0.87
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 302 KTFLQHRNSKLLLKRLCQQRVTMKATEKR 388
           K FLQ ++ KL+LKRLC++       +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 29.9 bits (64), Expect = 0.87
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 302 KTFLQHRNSKLLLKRLCQQRVTMKATEKR 388
           K FLQ ++ KL+LKRLC++       +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical
           protein C12D8.5 protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 367 YESDGEEAFPELEVPEPIEVSKNFW 441
           Y  DG E  PE E+PE  E++  FW
Sbjct: 189 YHCDGAE--PEWEIPEITEITDGFW 211


>Z73974-2|CAA98271.2|  713|Caenorhabditis elegans Hypothetical
           protein F29F11.4 protein.
          Length = 713

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +1

Query: 205 EETPLALQRLWNLTRARLAGTSTAIDVEPAFVENFPPAQEFEVTPKALVSAT--SDYESD 378
           E  PL ++   NL +  +A T  + +    F E F      +VT   + S    SD ESD
Sbjct: 353 EAPPLGIRMAPNLMQ--IAATHVSEEKRGFFAE-FKDWFAGKVTDNVIQSKLEDSDDESD 409

Query: 379 GEEAFPELEVPEPIEVSKN 435
            EEA  E + P+   V+ N
Sbjct: 410 SEEALEEFDSPQIATVTAN 428


>AY079165-1|AAL86012.1|  585|Caenorhabditis elegans NADPH-dependent
           flavin reductase protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -2

Query: 252 GTGKVP-KALEGQRSLFALHFHG 187
           GTG  P ++L G RSLF+ HF G
Sbjct: 459 GTGVAPFRSLFGHRSLFSAHFPG 481


>AL132858-12|CAB60480.1|  585|Caenorhabditis elegans Hypothetical
           protein Y113G7A.8 protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -2

Query: 252 GTGKVP-KALEGQRSLFALHFHG 187
           GTG  P ++L G RSLF+ HF G
Sbjct: 459 GTGVAPFRSLFGHRSLFSAHFPG 481


>U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical
           protein ZK328.4 protein.
          Length = 532

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 295 FVENFPPAQEFEVTPKAL-VSATSDYESDGEEAFPELEVP 411
           F  N  P Q+ +   KAL V + SDYE+D +E  P    P
Sbjct: 115 FDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKP 154


>AC006833-11|AAU87801.1|  175|Caenorhabditis elegans Enhancer of
           hand mutation hnd-1protein 3, isoform c protein.
          Length = 175

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
 Frame = -2

Query: 303 FNERWFHIDGSGCPRESGTGKVPKALEGQRSL--FALHFHG*VSEHLPLESLV 151
           F    FH+D     R S   K    ++   S     LHFH    +H PL S V
Sbjct: 29  FTSLQFHVDSEHIIRGSSPAKCKSCIKWFNSSHRLLLHFHTAHLDHTPLHSTV 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,094,792
Number of Sequences: 27780
Number of extensions: 215959
Number of successful extensions: 676
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)