Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19g18
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080131-1|AAD19341.1|  312|Drosophila melanogaster ribosomal pr...    98   7e-21
U42587-1|AAB17433.1|  299|Drosophila melanogaster ribosomal prot...    97   1e-20
BT025837-1|ABF85737.1|  299|Drosophila melanogaster IP11377p pro...    97   1e-20
AY118961-1|AAM50821.1|  299|Drosophila melanogaster LD40873p pro...    97   1e-20
AL132792-4|CAB60023.1|  299|Drosophila melanogaster EG:BACR19J1....    97   1e-20
AE014298-104|AAF45546.1|  299|Drosophila melanogaster CG7434-PA ...    97   1e-20
AY089455-1|AAL90193.1|  312|Drosophila melanogaster AT26853p pro...    67   1e-11
AE013599-3561|AAF46972.1|  312|Drosophila melanogaster CG9871-PA...    67   1e-11

>AF080131-1|AAD19341.1|  312|Drosophila melanogaster ribosomal
           protein L22 protein.
          Length = 312

 Score = 97.9 bits (233), Expect = 7e-21
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +1

Query: 163 NLKFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKTKVAITADIPF 342
           +L+FTIDCT+ AEDSI+ V +FEKY+K  + V GK NNL N+V   R K K+ +++D+ F
Sbjct: 203 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLTVSSDVHF 262

Query: 343 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
           S                  DW+RVVA+  D+YELRYF
Sbjct: 263 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 299


>U42587-1|AAB17433.1|  299|Drosophila melanogaster ribosomal protein
           Rpl22 protein.
          Length = 299

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +1

Query: 163 NLKFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKTKVAITADIPF 342
           +L+FTIDCT+ AEDSI+ V +FEKY+K  + V GK NNL N+V   R K K+ +++D+ F
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHF 249

Query: 343 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
           S                  DW+RVVA+  D+YELRYF
Sbjct: 250 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286


>BT025837-1|ABF85737.1|  299|Drosophila melanogaster IP11377p
           protein.
          Length = 299

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +1

Query: 163 NLKFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKTKVAITADIPF 342
           +L+FTIDCT+ AEDSI+ V +FEKY+K  + V GK NNL N+V   R K K+ +++D+ F
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHF 249

Query: 343 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
           S                  DW+RVVA+  D+YELRYF
Sbjct: 250 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286


>AY118961-1|AAM50821.1|  299|Drosophila melanogaster LD40873p
           protein.
          Length = 299

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +1

Query: 163 NLKFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKTKVAITADIPF 342
           +L+FTIDCT+ AEDSI+ V +FEKY+K  + V GK NNL N+V   R K K+ +++D+ F
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHF 249

Query: 343 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
           S                  DW+RVVA+  D+YELRYF
Sbjct: 250 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286


>AL132792-4|CAB60023.1|  299|Drosophila melanogaster
           EG:BACR19J1.4,FBgn0015288;RpL22 protein.
          Length = 299

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +1

Query: 163 NLKFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKTKVAITADIPF 342
           +L+FTIDCT+ AEDSI+ V +FEKY+K  + V GK NNL N+V   R K K+ +++D+ F
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHF 249

Query: 343 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
           S                  DW+RVVA+  D+YELRYF
Sbjct: 250 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286


>AE014298-104|AAF45546.1|  299|Drosophila melanogaster CG7434-PA
           protein.
          Length = 299

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +1

Query: 163 NLKFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKTKVAITADIPF 342
           +L+FTIDCT+ AEDSI+ V +FEKY+K  + V GK NNL N+V   R K K+ +++D+ F
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHF 249

Query: 343 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
           S                  DW+RVVA+  D+YELRYF
Sbjct: 250 SKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286


>AY089455-1|AAL90193.1|  312|Drosophila melanogaster AT26853p
           protein.
          Length = 312

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +1

Query: 169 KFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKT-KVAITADIPFS 345
           +F IDC   AED IL + +FE+YLK H+ ++ K N L + V   R K   + I + + FS
Sbjct: 193 RFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVHFS 252

Query: 346 XXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
                             DWLRVV++A D + + YF
Sbjct: 253 KRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYF 288


>AE013599-3561|AAF46972.1|  312|Drosophila melanogaster CG9871-PA
           protein.
          Length = 312

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +1

Query: 169 KFTIDCTHPAEDSILXVGNFEKYLKEHVXVEGKTNNLSNHVVVARDKT-KVAITADIPFS 345
           +F IDC   AED IL + +FE+YLK H+ ++ K N L + V   R K   + I + + FS
Sbjct: 193 RFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVHFS 252

Query: 346 XXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 453
                             DWLRVV++A D + + YF
Sbjct: 253 KRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYF 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,040,659
Number of Sequences: 53049
Number of extensions: 329493
Number of successful extensions: 653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)