Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19g13
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 263 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 358
           +VLFIL + +G +   F QF+  +  H +  L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 263 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 358
           +VLFIL + +G +   F QF+  +  H +  L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 263 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 358
           +VLFIL + +G +   F QF+  +  H +  L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 263 NVLFILNLMKGYLLRCFCQFTRPYRKHAVATL 358
           +VLFIL + +G +   F QF+  +  H +  L
Sbjct: 313 SVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/29 (20%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 VCAILTKMAMGSSLLRNCDTCSLLSERSL 463
           +C ++  +   S ++  CD C++ S++++
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQTI 309


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/29 (20%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 VCAILTKMAMGSSLLRNCDTCSLLSERSL 463
           +C ++  +   S ++  CD C++ S++++
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQTI 309


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 199 HVSFHLHENRRAGRLLEILPIDPLNIQPY 113
           +VS H  +N+R+G  L++  +D L  + Y
Sbjct: 23  NVSLHSLKNKRSGASLQVGILDSLVFKCY 51



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 32  LYFVALR*VAAFKYTYFITFNFICRFIIW 118
           L+ V L  +    Y Y++   F C FII+
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLFCCAFIIF 275


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 271 LHLKPDERISFEVFLPIYQAISKARSGDTANDFI 372
           LHL   + +SF + LP  Q +  AR G    D I
Sbjct: 250 LHLHLTDAVSFPIVLPKVQEL--ARFGAYGPDMI 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,692
Number of Sequences: 336
Number of extensions: 3090
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)