Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19g08
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002849-1|AAH02849.1|  177|Homo sapiens coatomer protein comple...   164   1e-40
AF151878-1|AAD34115.1|  177|Homo sapiens CGI-120 protein protein.     164   1e-40
AF086911-1|AAP97141.1|  177|Homo sapiens z-cop protein.               164   1e-40
AB047848-1|BAB17659.1|  177|Homo sapiens zeta1-COP protein.           164   1e-40
AK223188-1|BAD96908.1|  177|Homo sapiens coatomer protein comple...   162   5e-40
BC015924-1|AAH15924.1|  210|Homo sapiens coatomer protein comple...   142   4e-34
AB047849-1|BAB17660.1|  210|Homo sapiens zeta2-COP protein.           142   4e-34
AB037938-1|BAA90670.1|  210|Homo sapiens nonclathrin coat protei...   142   4e-34

>BC002849-1|AAH02849.1|  177|Homo sapiens coatomer protein complex,
           subunit zeta 1 protein.
          Length = 177

 Score =  164 bits (399), Expect = 1e-40
 Identities = 73/125 (58%), Positives = 103/125 (82%)
 Frame = +1

Query: 103 MEGSLFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 282
           ME  + EP+LY VK + ILD +G+R+ A YYD D  P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1   MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59

Query: 283 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 462
            +L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60  ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119

Query: 463 AVMLA 477
            + LA
Sbjct: 120 GLFLA 124


>AF151878-1|AAD34115.1|  177|Homo sapiens CGI-120 protein protein.
          Length = 177

 Score =  164 bits (399), Expect = 1e-40
 Identities = 73/125 (58%), Positives = 103/125 (82%)
 Frame = +1

Query: 103 MEGSLFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 282
           ME  + EP+LY VK + ILD +G+R+ A YYD D  P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1   MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59

Query: 283 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 462
            +L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60  ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119

Query: 463 AVMLA 477
            + LA
Sbjct: 120 GLFLA 124


>AF086911-1|AAP97141.1|  177|Homo sapiens z-cop protein.
          Length = 177

 Score =  164 bits (399), Expect = 1e-40
 Identities = 73/125 (58%), Positives = 103/125 (82%)
 Frame = +1

Query: 103 MEGSLFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 282
           ME  + EP+LY VK + ILD +G+R+ A YYD D  P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1   MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59

Query: 283 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 462
            +L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60  ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119

Query: 463 AVMLA 477
            + LA
Sbjct: 120 GLFLA 124


>AB047848-1|BAB17659.1|  177|Homo sapiens zeta1-COP protein.
          Length = 177

 Score =  164 bits (399), Expect = 1e-40
 Identities = 73/125 (58%), Positives = 103/125 (82%)
 Frame = +1

Query: 103 MEGSLFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 282
           ME  + EP+LY VK + ILD +G+R+ A YYD D  P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1   MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59

Query: 283 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 462
            +L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60  ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119

Query: 463 AVMLA 477
            + LA
Sbjct: 120 GLFLA 124


>AK223188-1|BAD96908.1|  177|Homo sapiens coatomer protein complex,
           subunit zeta 1 variant protein.
          Length = 177

 Score =  162 bits (394), Expect = 5e-40
 Identities = 72/125 (57%), Positives = 102/125 (81%)
 Frame = +1

Query: 103 MEGSLFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 282
           ME  + EP+LY VK + ILD +G+R+ A YYD D  P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1   MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59

Query: 283 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 462
            +L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+  +LR+N+E+R L+EN++
Sbjct: 60  ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLRQMLRKNVEKRALLENME 119

Query: 463 AVMLA 477
            + LA
Sbjct: 120 GLFLA 124


>BC015924-1|AAH15924.1|  210|Homo sapiens coatomer protein complex,
           subunit zeta 2 protein.
          Length = 210

 Score =  142 bits (345), Expect = 4e-34
 Identities = 66/120 (55%), Positives = 90/120 (75%)
 Frame = +1

Query: 115 LFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 294
           L EP+LY +K + ILD +G R+LA YYD D  P+ KEQ  FEKN+FNKT R  +EI    
Sbjct: 38  LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96

Query: 295 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 474
           G+T VYK+++DLF YV+GSS+ENEL+L SVL  L+ES++ +LR+N+E+R L+EN+D   L
Sbjct: 97  GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156


>AB047849-1|BAB17660.1|  210|Homo sapiens zeta2-COP protein.
          Length = 210

 Score =  142 bits (345), Expect = 4e-34
 Identities = 66/120 (55%), Positives = 90/120 (75%)
 Frame = +1

Query: 115 LFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 294
           L EP+LY +K + ILD +G R+LA YYD D  P+ KEQ  FEKN+FNKT R  +EI    
Sbjct: 38  LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96

Query: 295 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 474
           G+T VYK+++DLF YV+GSS+ENEL+L SVL  L+ES++ +LR+N+E+R L+EN+D   L
Sbjct: 97  GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156


>AB037938-1|BAA90670.1|  210|Homo sapiens nonclathrin coat protein
           zeta-COP protein.
          Length = 210

 Score =  142 bits (345), Expect = 4e-34
 Identities = 66/120 (55%), Positives = 90/120 (75%)
 Frame = +1

Query: 115 LFEPTLYIVKGMCILDYEGNRILAXYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 294
           L EP+LY +K + ILD +G R+LA YYD D  P+ KEQ  FEKN+FNKT R  +EI    
Sbjct: 38  LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96

Query: 295 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 474
           G+T VYK+++DLF YV+GSS+ENEL+L SVL  L+ES++ +LR+N+E+R L+EN+D   L
Sbjct: 97  GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,197,383
Number of Sequences: 237096
Number of extensions: 1401405
Number of successful extensions: 2904
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2896
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)